Literature DB >> 22687277

Genomic imprinting and epigenetic control of development.

Andrew Fedoriw1, Joshua Mugford, Terry Magnuson.   

Abstract

Epigenetic mechanisms are extensively utilized during mammalian development. Specific patterns of gene expression are established during cell fate decisions, maintained as differentiation progresses, and often augmented as more specialized cell types are required. Much of what is known about these mechanisms comes from the study of two distinct epigenetic phenomena: genomic imprinting and X-chromosome inactivation. In the case of genomic imprinting, alleles are expressed in a parent-of-origin-dependent manner, whereas X-chromosome inactivation in females requires that only one X chromosome is active in each somatic nucleus. As model systems for epigenetic regulation, genomic imprinting and X-chromosome inactivation have identified and elucidated the numerous regulatory mechanisms that function throughout the genome during development.

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Year:  2012        PMID: 22687277      PMCID: PMC3385953          DOI: 10.1101/cshperspect.a008136

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  117 in total

1.  Deletion of a silencer element in Igf2 results in loss of imprinting independent of H19.

Authors:  M Constância; W Dean; S Lopes; T Moore; G Kelsey; W Reik
Journal:  Nat Genet       Date:  2000-10       Impact factor: 38.330

2.  Epigenetic dynamics of imprinted X inactivation during early mouse development.

Authors:  Ikuhiro Okamoto; Arie P Otte; C David Allis; Danny Reinberg; Edith Heard
Journal:  Science       Date:  2003-12-11       Impact factor: 47.728

3.  Crucial role of antisense transcription across the Xist promoter in Tsix-mediated Xist chromatin modification.

Authors:  Tatsuya Ohhata; Yuko Hoki; Hiroyuki Sasaki; Takashi Sado
Journal:  Development       Date:  2007-12-05       Impact factor: 6.868

Review 4.  Genome-wide transcription and the implications for genomic organization.

Authors:  Philipp Kapranov; Aarron T Willingham; Thomas R Gingeras
Journal:  Nat Rev Genet       Date:  2007-05-08       Impact factor: 53.242

Review 5.  X inactivation and the complexities of silencing a sex chromosome.

Authors:  Jennifer Chow; Edith Heard
Journal:  Curr Opin Cell Biol       Date:  2009-05-26       Impact factor: 8.382

6.  The long noncoding RNA Kcnq1ot1 organises a lineage-specific nuclear domain for epigenetic gene silencing.

Authors:  Lisa Redrup; Miguel R Branco; Elizabeth R Perdeaux; Christel Krueger; Annabelle Lewis; Fátima Santos; Takashi Nagano; Bradley S Cobb; Peter Fraser; Wolf Reik
Journal:  Development       Date:  2009-01-14       Impact factor: 6.868

7.  Molecular coupling of Xist regulation and pluripotency.

Authors:  Pablo Navarro; Ian Chambers; Violetta Karwacki-Neisius; Corinne Chureau; Céline Morey; Claire Rougeulle; Philip Avner
Journal:  Science       Date:  2008-09-19       Impact factor: 47.728

8.  Acquisition of the H19 methylation imprint occurs differentially on the parental alleles during spermatogenesis.

Authors:  T L Davis; J M Trasler; S B Moss; G J Yang; M S Bartolomei
Journal:  Genomics       Date:  1999-05-15       Impact factor: 5.736

9.  An enhancer deletion affects both H19 and Igf2 expression.

Authors:  P A Leighton; J R Saam; R S Ingram; C L Stewart; S M Tilghman
Journal:  Genes Dev       Date:  1995-09-01       Impact factor: 11.361

10.  Sp1 elements protect a CpG island from de novo methylation.

Authors:  M Brandeis; D Frank; I Keshet; Z Siegfried; M Mendelsohn; A Nemes; V Temper; A Razin; H Cedar
Journal:  Nature       Date:  1994-09-29       Impact factor: 49.962

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  19 in total

1.  Locus-specific DNA methylation in the placenta is associated with levels of pro-inflammatory proteins in cord blood and they are both independently affected by maternal smoking during pregnancy.

Authors:  Sanne D van Otterdijk; Alexandra M Binder; Karin B Michels
Journal:  Epigenetics       Date:  2017-12-12       Impact factor: 4.528

Review 2.  Epigenetic dysfunctional diseases and therapy for infection and inflammation.

Authors:  Saheli Samanta; Sheeja Rajasingh; Thuy Cao; Buddhadeb Dawn; Johnson Rajasingh
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2016-12-03       Impact factor: 5.187

3.  Aclust2.0: a revamped unsupervised R tool for Infinium methylation beadchips data analyses.

Authors:  Oladele A Oluwayiose; Haotian Wu; Feng Gao; Andrea A Baccarelli; Tamar Sofer; J Richard Pilsner
Journal:  Bioinformatics       Date:  2022-10-14       Impact factor: 6.931

4.  Human non-CpG methylation patterns display both tissue-specific and inter-individual differences suggestive of underlying function.

Authors:  Philip Titcombe; Robert Murray; Matthew Hewitt; Elie Antoun; Cyrus Cooper; Hazel M Inskip; Joanna D Holbrook; Keith M Godfrey; Karen Lillycrop; Mark Hanson; Sheila J Barton
Journal:  Epigenetics       Date:  2021-08-30       Impact factor: 4.861

5.  Developmental arsenic exposure impairs cognition, directly targets DNMT3A, and reduces DNA methylation.

Authors:  Ni Yan; Yuntong Li; Yangfei Xing; Jiale Wu; Jiabing Li; Ying Liang; Yigang Tang; Zhengyuan Wang; Huaxin Song; Haoyu Wang; Shujun Xiao; Min Lu
Journal:  EMBO Rep       Date:  2022-04-04       Impact factor: 9.071

6.  Dysregulated A to I RNA editing and non-coding RNAs in neurodegeneration.

Authors:  Minati Singh
Journal:  Front Genet       Date:  2013-01-22       Impact factor: 4.599

7.  microRNA-7 suppresses the invasive potential of breast cancer cells and sensitizes cells to DNA damages by targeting histone methyltransferase SET8.

Authors:  Na Yu; Peiwei Huangyang; Xiaohan Yang; Xiao Han; Ruorong Yan; Hongti Jia; Yongfeng Shang; Luyang Sun
Journal:  J Biol Chem       Date:  2013-05-17       Impact factor: 5.157

8.  H19/Igf2 Expression and Methylation of Histone 3 in Mice Chimeric Blastocysts.

Authors:  Maryam Salimi; Abolfazl Shirazi; Mohsen Norouzian; Ameneh Jafari; Haleh Edalatkhah; Maryam Mehravar; Mohammad Majidi; Mohammad Mahdi Mehrazar
Journal:  Rep Biochem Mol Biol       Date:  2020-10

9.  Discovering non-random segregation of sister chromatids: the naïve treatment of a premature discovery.

Authors:  Karl G Lark
Journal:  Front Oncol       Date:  2013-02-01       Impact factor: 6.244

10.  Genomic imprinting in mouse blastocysts is predominantly associated with H3K27me3.

Authors:  Laura Santini; Florian Halbritter; Fabian Titz-Teixeira; Toru Suzuki; Maki Asami; Xiaoyan Ma; Julia Ramesmayer; Andreas Lackner; Nick Warr; Florian Pauler; Simon Hippenmeyer; Ernest Laue; Matthias Farlik; Christoph Bock; Andreas Beyer; Anthony C F Perry; Martin Leeb
Journal:  Nat Commun       Date:  2021-06-21       Impact factor: 14.919

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