Literature DB >> 12693442

Streptomyces genetics: a genomic perspective.

Ashish Paradkar1, Axel Trefzer, Rekha Chakraburtty, Diane Stassi.   

Abstract

Streptomycetes are gram-positive, soil-inhabiting bacteria of the order Actinomycetales. These organisms exhibit an unusual, developmentally complex life cycle and produce many economically important secondary metabolites, such as antibiotics, immunosuppressants, insecticides, and anti-tumor agents. Streptomyces species have been the subject of genetic investigation for over 50 years, with many studies focusing on the developmental cycle and the production of secondary metabolites. This information provides a solid foundation for the application of structural and functional genomics to the actinomycetes. The complete DNA sequence of the model organism, Streptomyces coelicolor M145, has been published recently, with others expected to follow soon. As more genomic sequences become available, the rational genetic manipulation of these organisms to elucidate metabolic and regulatory networks, to increase the production of commercially important compounds, and to create novel secondary metabolites will be greatly facilitated. This review presents the current state of the field of genomics as it is being applied to the actinomycetes.

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Year:  2003        PMID: 12693442     DOI: 10.1080/713609296

Source DB:  PubMed          Journal:  Crit Rev Biotechnol        ISSN: 0738-8551            Impact factor:   8.429


  13 in total

Review 1.  Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria.

Authors:  Beile Gao; Radhey S Gupta
Journal:  Microbiol Mol Biol Rev       Date:  2012-03       Impact factor: 11.056

2.  Intracellular screen to identify metagenomic clones that induce or inhibit a quorum-sensing biosensor.

Authors:  Lynn L Williamson; Bradley R Borlee; Patrick D Schloss; Changhui Guan; Heather K Allen; Jo Handelsman
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

3.  Actinobacteria cyclophilins: phylogenetic relationships and description of new class- and order-specific paralogues.

Authors:  Angel Manteca; Ana I Pelaez; Rafael Zardoya; Jesus Sanchez
Journal:  J Mol Evol       Date:  2006-11-10       Impact factor: 2.395

4.  Streptomyces development in colonies and soils.

Authors:  Angel Manteca; Jesus Sanchez
Journal:  Appl Environ Microbiol       Date:  2009-03-06       Impact factor: 4.792

5.  A novel regio‑specific cyclosporin hydroxylase gene revealed through the genome mining of Pseudonocardia autotrophica.

Authors:  Jun-Gyu Ban; Min-Woo Woo; Bo-Ram Lee; Mi-Jin Lee; Si-Sun Choi; Eung-Soo Kim
Journal:  J Ind Microbiol Biotechnol       Date:  2014-05       Impact factor: 3.346

6.  Tools for metabolic engineering in Streptomyces.

Authors:  Valerie Bekker; Amanda Dodd; Dean Brady; Karl Rumbold
Journal:  Bioengineered       Date:  2014 Sep-Oct       Impact factor: 3.269

7.  Probing the molecular mechanisms for pristinamycin yield enhancement in Streptomyces pristinaespiralis.

Authors:  Qingchao Jin; Zhihua Jin; Lijing Zhang; Shanjing Yao; Fuyong Li
Journal:  Curr Microbiol       Date:  2012-09-19       Impact factor: 2.188

Review 8.  Improvement of secondary metabolite production in Streptomyces by manipulating pathway regulation.

Authors:  Yihua Chen; Michael J Smanski; Ben Shen
Journal:  Appl Microbiol Biotechnol       Date:  2010-01-21       Impact factor: 4.813

9.  Inhibitory effects of a branched-chain fatty acid on larval settlement of the polychaete Hydroides elegans.

Authors:  Ying Xu; Honglei Li; Xiancui Li; Xiang Xiao; Pei-Yuan Qian
Journal:  Mar Biotechnol (NY)       Date:  2008-11-22       Impact factor: 3.619

10.  Genome-wide inference of regulatory networks in Streptomyces coelicolor.

Authors:  Marlene Castro-Melchor; Salim Charaniya; George Karypis; Eriko Takano; Wei-Shou Hu
Journal:  BMC Genomics       Date:  2010-10-18       Impact factor: 3.969

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