Literature DB >> 12676708

Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source.

Byron C Crump1, George W Kling, Michele Bahr, John E Hobbie.   

Abstract

Seasonal shifts in bacterioplankton community composition in Toolik Lake, a tundra lake on the North Slope of Alaska, were related to shifts in the source (terrestrial versus phytoplankton) and lability of dissolved organic matter (DOM). A shift in community composition, measured by denaturing gradient gel electrophoresis (DGGE) of 16S rRNA genes, occurred at 4 degrees C in near-surface waters beneath seasonal ice and snow cover in spring. This shift was associated with an annual peak in bacterial productivity ([(14)C]leucine incorporation) driven by the large influx of labile terrestrial DOM associated with snow meltwater. A second shift occurred after the flux of terrestrial DOM had ended in early summer as ice left the lake and as the phytoplankton community developed. Bacterioplankton communities were composed of persistent populations present throughout the year and transient populations that appeared and disappeared. Most of the transient populations could be divided into those that were advected into the lake with terrestrial DOM in spring and those that grew up from low concentrations during the development of the phytoplankton community in early summer. Sequencing of DNA in DGGE bands demonstrated that most bands represented single ribotypes and that matching bands from different samples represented identical ribotypes. Bacteria were identified as members of globally distributed freshwater phylogenetic clusters within the alpha- and beta-Proteobacteria, the Cytophaga-Flavobacteria-Bacteroides group, and the ACTINOBACTERIA:

Mesh:

Substances:

Year:  2003        PMID: 12676708      PMCID: PMC154827          DOI: 10.1128/AEM.69.4.2253-2268.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  20 in total

1.  Seasonal dynamics of bacterioplankton community structure in a eutrophic lake as determined by 5S rRNA analysis.

Authors:  M G Höfle; H Haas; K Dominik
Journal:  Appl Environ Microbiol       Date:  1999-07       Impact factor: 4.792

2.  Dynamics of bacterial community composition and activity during a mesocosm diatom bloom.

Authors:  L Riemann; G F Steward; F Azam
Journal:  Appl Environ Microbiol       Date:  2000-02       Impact factor: 4.792

3.  Bacterioplankton Production in Humic Lake Örträsket in Relation to Input of Bacterial Cells and Input of Allochthonous Organic Carbon.

Authors: 
Journal:  Microb Ecol       Date:  2000-02       Impact factor: 4.552

4.  Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria.

Authors:  F O Glöckner; E Zaichikov; N Belkova; L Denissova; J Pernthaler; A Pernthaler; R Amann
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

5.  Spatial differences in bacterioplankton composition along the Catalan coast (NW Mediterranean) assessed by molecular fingerprinting.

Authors: 
Journal:  FEMS Microbiol Ecol       Date:  2000-07-01       Impact factor: 4.194

6.  Detritus-dependent development of the microbial community in an experimental system: qualitative analysis by denaturing gradient gel electrophoresis.

Authors:  E J van Hannen; W Mooij; M P van Agterveld; H J Gons; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  1999-06       Impact factor: 4.792

7.  Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Oceans.

Authors:  J A Fuhrman; K McCallum; A A Davis
Journal:  Appl Environ Microbiol       Date:  1993-05       Impact factor: 4.792

8.  Changes in bacterial and eukaryotic community structure after mass lysis of filamentous cyanobacteria associated with viruses.

Authors:  E J van Hannen; G Zwart; M P van Agterveld; H J Gons; J Ebert; H J Laanbroek
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792

9.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

10.  Genetic diversity in Sargasso Sea bacterioplankton.

Authors:  S J Giovannoni; T B Britschgi; C L Moyer; K G Field
Journal:  Nature       Date:  1990-05-03       Impact factor: 49.962

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  98 in total

1.  Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time.

Authors:  Byron C Crump; Charles S Hopkinson; Mitchell L Sogin; John E Hobbie
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

2.  Spatial variability overwhelms seasonal patterns in bacterioplankton communities across a river to ocean gradient.

Authors:  Caroline S Fortunato; Lydie Herfort; Peter Zuber; Antonio M Baptista; Byron C Crump
Journal:  ISME J       Date:  2011-10-20       Impact factor: 10.302

3.  Shifts in identity and activity of methanotrophs in arctic lake sediments in response to temperature changes.

Authors:  Ruo He; Matthew J Wooller; John W Pohlman; John Quensen; James M Tiedje; Mary Beth Leigh
Journal:  Appl Environ Microbiol       Date:  2012-04-20       Impact factor: 4.792

4.  Microbial diversity in arctic freshwaters is structured by inoculation of microbes from soils.

Authors:  Byron C Crump; Linda A Amaral-Zettler; George W Kling
Journal:  ISME J       Date:  2012-03-01       Impact factor: 10.302

5.  Temporal patterns in glycolate-utilizing bacterial community composition correlate with phytoplankton population dynamics in humic lakes.

Authors:  Sara F Paver; Angela D Kent
Journal:  Microb Ecol       Date:  2010-07-22       Impact factor: 4.552

6.  Polynucleobacter rarus sp. nov., a free-living planktonic bacterium isolated from an acidic lake.

Authors:  Martin W Hahn; Elke Lang; Mitsunori Tarao; Ulrike Brandt
Journal:  Int J Syst Evol Microbiol       Date:  2010-04-30       Impact factor: 2.747

7.  Experimentally simulated global warming and nitrogen enrichment effects on microbial litter decomposers in a marsh.

Authors:  Sabine Flury; Mark O Gessner
Journal:  Appl Environ Microbiol       Date:  2010-12-10       Impact factor: 4.792

8.  Diversity of active aerobic methanotrophs along depth profiles of arctic and subarctic lake water column and sediments.

Authors:  Ruo He; Matthew J Wooller; John W Pohlman; John Quensen; James M Tiedje; Mary Beth Leigh
Journal:  ISME J       Date:  2012-05-17       Impact factor: 10.302

9.  Annual patterns in bacterioplankton community variability in a humic lake.

Authors:  A D Kent; S E Jones; A C Yannarell; J M Graham; G H Lauster; T K Kratz; E W Triplett
Journal:  Microb Ecol       Date:  2004-10-28       Impact factor: 4.552

10.  Respiratory succession and community succession of bacterioplankton in seasonally anoxic estuarine waters.

Authors:  Byron C Crump; Cherie Peranteau; Barbara Beckingham; Jeffrey C Cornwell
Journal:  Appl Environ Microbiol       Date:  2007-08-31       Impact factor: 4.792

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