Literature DB >> 12663547

A high-copy-number CACTA family transposon in temperate grasses and cereals.

Tim Langdon1, Glyn Jenkins, Robert Hasterok, R Neil Jones, Ian P King.   

Abstract

A lineage of CACTA family transposons has been identified in temperate grasses and cereals, and a full-length representative of the subfamily from Lolium perenne has been sequenced. Both the size and internal organization of the L. perenne element are typical of other CACTA family elements but its high copy number and strong conservation are unexpected. Comparison with homologs in other species suggests that this lineage has adopted a distinct and novel evolutionary strategy, which has allowed it to maintain its presence in genomes over long periods of time.

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Year:  2003        PMID: 12663547      PMCID: PMC1462479     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  30 in total

1.  The structure and paramutagenicity of the R-marbled haplotype of Zea mays.

Authors:  T Panavas; J Weir; E L Walker
Journal:  Genetics       Date:  1999-10       Impact factor: 4.562

Review 2.  Plant retrotransposons.

Authors:  A Kumar; J L Bennetzen
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

3.  De novo evolution of satellite DNA on the rye B chromosome.

Authors:  T Langdon; C Seago; R N Jones; H Ougham; H Thomas; J W Forster; G Jenkins
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

4.  Structural domains and matrix attachment regions along colinear chromosomal segments of maize and sorghum.

Authors:  A P Tikhonov; J L Bennetzen; Z V Avramova
Journal:  Plant Cell       Date:  2000-02       Impact factor: 11.277

Review 5.  It takes two transposons to tango: transposable-element-mediated chromosomal rearrangements.

Authors:  Y H Gray
Journal:  Trends Genet       Date:  2000-10       Impact factor: 11.639

6.  Retrotransposon evolution in diverse plant genomes.

Authors:  T Langdon; C Seago; M Mende; M Leggett; H Thomas; J W Forster; R N Jones; G Jenkins
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

7.  Recent, extensive, and preferential insertion of members of the miniature inverted-repeat transposable element family Heartbreaker into genic regions of maize.

Authors:  Q Zhang; J Arbuckle; S R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-01       Impact factor: 11.205

8.  Resistance to gap repair of the transposon Tam3 in Antirrhinum majus: a role of the end regions.

Authors:  S Yamashita; T Takano-Shimizu; K Kitamura; T Mikami; Y Kishima
Journal:  Genetics       Date:  1999-12       Impact factor: 4.562

9.  Probing meiosis in hybrids of Lolium (Poaceae) with a discriminatory repetitive genomic sequence.

Authors:  G Jenkins; J Head; J W Forster
Journal:  Chromosoma       Date:  2000-07       Impact factor: 4.316

Review 10.  Genome juggling by transposons: Tam3-induced rearrangements in Antirrhinum majus.

Authors:  C Martin; C Lister
Journal:  Dev Genet       Date:  1989
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  17 in total

1.  Evolutionary analysis of the CACTA DNA-transposon Caspar across wheat species using sequence comparison and in situ hybridization.

Authors:  Ekaterina M Sergeeva; Elena A Salina; Irina G Adonina; Boulos Chalhoub
Journal:  Mol Genet Genomics       Date:  2010-05-29       Impact factor: 3.291

2.  Ac-like transposons in populations of wild diploid Triticeae species: comparative analysis of chromosomal distribution.

Authors:  Ahu Altinkut; Violetta Kotseruba; Valery M Kirzhner; Eviatar Nevo; Olga Raskina; Alexander Belyayev
Journal:  Chromosome Res       Date:  2006-04-20       Impact factor: 5.239

3.  Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome.

Authors:  Maura Lyons; Linda Cardle; Nils Rostoks; Robbie Waugh; Andrew J Flavell
Journal:  Mol Genet Genomics       Date:  2008-07-09       Impact factor: 3.291

4.  Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat.

Authors:  Katrien M Devos; Jianxin Ma; Ana C Pontaroli; Lee H Pratt; Jeffrey L Bennetzen
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-15       Impact factor: 11.205

5.  Genomic diversity of Ac-like transposable elements in sphaerococcum mutant forms of common wheat (Triticum aestivum L.) and triticale (X Triticosecale Witt.).

Authors:  Georgi Bonchev; Lubomir Stoilov; Zorniza Angelova; Sevdalin Georgiev
Journal:  J Appl Genet       Date:  2011-10-05       Impact factor: 3.240

6.  A putative autonomous 20.5 kb-CACTA transposon insertion in an F3'H allele identifies a new CACTA transposon subfamily in Glycine max.

Authors:  Gracia Zabala; Lila Vodkin
Journal:  BMC Plant Biol       Date:  2008-12-02       Impact factor: 4.215

7.  Revolver and superior: novel transposon-like gene families of the plant kingdom.

Authors:  Motonori Tomita
Journal:  Curr Genomics       Date:  2010-03       Impact factor: 2.236

8.  Genome-wide comparative analysis of the transposable elements in the related species Arabidopsis thaliana and Brassica oleracea.

Authors:  Xiaoyu Zhang; Susan R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-02       Impact factor: 11.205

9.  Revolver is a new class of transposon-like gene composing the triticeae genome.

Authors:  Motonori Tomita; Kasumi Shinohara; Mayu Morimoto
Journal:  DNA Res       Date:  2008-02-29       Impact factor: 4.458

10.  Androgenic-Induced Transposable Elements Dependent Sequence Variation in Barley.

Authors:  Renata Orłowska; Katarzyna A Pachota; Wioletta M Dynkowska; Agnieszka Niedziela; Piotr T Bednarek
Journal:  Int J Mol Sci       Date:  2021-06-24       Impact factor: 5.923

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