Literature DB >> 12663530

Multiple translational control sequences in the 5' leader of the chloroplast psbC mRNA interact with nuclear gene products in Chlamydomonas reinhardtii.

William Zerges1, Andrea H Auchincloss, Jean-David Rochaix.   

Abstract

Translation of the chloroplast psbC mRNA in the unicellular eukaryotic alga Chlamydomonas reinhardtii is controlled by interactions between its 547-base 5' untranslated region and the products of the nuclear loci TBC1, TBC2, and possibly TBC3. In this study, a series of site-directed mutations in this region was generated and the ability of these constructs to drive expression of a reporter gene was assayed in chloroplast transformants that are wild type or mutant at these nuclear loci. Two regions located in the middle of the 5' leader and near the initiation codon are important for translation. Other deletions still allow for partial expression of the reporter gene in the wild-type background. Regions with target sites for TBC1 and TBC2 were identified by estimating the residual translation activity in the respective mutant backgrounds. TBC1 targets include mostly the central part of the leader and the translation initiation region whereas the only detected TBC2 targets are in the 3' part. The 5'-most 93 nt of the leader are required for wild-type levels of transcription and/or mRNA stabilization. The results indicate that TBC1 and TBC2 function independently and further support the possibility that TBC1 acts together with TBC3.

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Year:  2003        PMID: 12663530      PMCID: PMC1462503     

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  35 in total

1.  Chloroplast ribosomal protein S7 of Chlamydomonas binds to chloroplast mRNA leader sequences and may be involved in translation initiation.

Authors:  D C Fargo; J E Boynton; N W Gillham
Journal:  Plant Cell       Date:  2001-01       Impact factor: 11.277

Review 2.  Initiation of translation in prokaryotes and eukaryotes.

Authors:  M Kozak
Journal:  Gene       Date:  1999-07-08       Impact factor: 3.688

Review 3.  Does complexity constrain organelle evolution?

Authors:  William Zerges
Journal:  Trends Plant Sci       Date:  2002-04       Impact factor: 18.313

4.  A role for initiation codon context in chloroplast translation.

Authors:  D Esposito; A J Hicks; D B Stern
Journal:  Plant Cell       Date:  2001-10       Impact factor: 11.277

5.  Trans-splicing mutants of Chlamydomonas reinhardtii.

Authors:  M Goldschmidt-Clermont; J Girard-Bascou; Y Choquet; J D Rochaix
Journal:  Mol Gen Genet       Date:  1990-09

Review 6.  Evolution and mechanism of translation in chloroplasts.

Authors:  M Sugiura; T Hirose; M Sugita
Journal:  Annu Rev Genet       Date:  1998       Impact factor: 16.830

Review 7.  Translational regulation in the chloroplast.

Authors:  A Danon
Journal:  Plant Physiol       Date:  1997-12       Impact factor: 8.340

8.  Identification of cis-acting RNA leader elements required for chloroplast psbD gene expression in Chlamydomonas.

Authors:  J Nickelsen; M Fleischmann; E Boudreau; M Rahire; J D Rochaix
Journal:  Plant Cell       Date:  1999-05       Impact factor: 11.277

9.  Sequence, evolution and differential expression of the two genes encoding variant small subunits of ribulose bisphosphate carboxylase/oxygenase in Chlamydomonas reinhardtii.

Authors:  M Goldschmidt-Clermont; M Rahire
Journal:  J Mol Biol       Date:  1986-10-05       Impact factor: 5.469

10.  Translation of the chloroplast psbA mRNA requires the nuclear-encoded poly(A)-binding protein, RB47.

Authors:  C B Yohn; A Cohen; C Rosch; M R Kuchka; S P Mayfield
Journal:  J Cell Biol       Date:  1998-07-27       Impact factor: 10.539

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  11 in total

Review 1.  Chlamydomonas reinhardtii at the crossroads of genomics.

Authors:  Arthur R Grossman; Elizabeth E Harris; Charles Hauser; Paul A Lefebvre; Diego Martinez; Dan Rokhsar; Jeff Shrager; Carolyn D Silflow; David Stern; Olivier Vallon; Zhaoduo Zhang
Journal:  Eukaryot Cell       Date:  2003-12

2.  Light-dependent attenuation of phycoerythrin gene expression reveals convergent evolution of green light sensing in cyanobacteria.

Authors:  Ryan P Bezy; Lisa Wiltbank; David M Kehoe
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-31       Impact factor: 11.205

3.  RNA-protein complexes that form in the spinach chloroplast atpI 5' untranslated region can be divided into two subcomplexes, each comprised of unique cis-elements and trans-factors.

Authors:  Patricia M Merhige; Dawn Both-Kim; Mark D Robida; Margaret J Hollingsworth
Journal:  Curr Genet       Date:  2005-11-04       Impact factor: 3.886

Review 4.  Chloroplast translation regulation.

Authors:  Julia Marín-Navarro; Andrea L Manuell; Joann Wu; Stephen P Mayfield
Journal:  Photosynth Res       Date:  2007-07-28       Impact factor: 3.573

5.  Regulatory sequences of orthologous petD chloroplast mRNAs are highly specific among Chlamydomonas species.

Authors:  Lynn M Kramzar; Toby Mueller; Brian Erickson; David C Higgs
Journal:  Plant Mol Biol       Date:  2006-02       Impact factor: 4.076

Review 6.  How to build functional thylakoid membranes: from plastid transcription to protein complex assembly.

Authors:  Dagmar Lyska; Karin Meierhoff; Peter Westhoff
Journal:  Planta       Date:  2012-09-14       Impact factor: 4.116

7.  Specific roles of 5' RNA secondary structures in stabilizing transcripts in chloroplasts.

Authors:  Loreto Suay; Maria L Salvador; Emnet Abesha; Uwe Klein
Journal:  Nucleic Acids Res       Date:  2005-08-22       Impact factor: 16.971

8.  Translation of chloroplast psbD mRNA in Chlamydomonas is controlled by a secondary RNA structure blocking the AUG start codon.

Authors:  Birgit Klinkert; Ingolf Elles; Jörg Nickelsen
Journal:  Nucleic Acids Res       Date:  2006-01-12       Impact factor: 16.971

9.  Structure of the chloroplast ribosome: novel domains for translation regulation.

Authors:  Andrea L Manuell; Joel Quispe; Stephen P Mayfield
Journal:  PLoS Biol       Date:  2007-08       Impact factor: 8.029

10.  The RNA Structure of cis-acting Translational Elements of the Chloroplast psbC mRNA in Chlamydomonas reinhardtii.

Authors:  Mir Munir A Rahim; Frederic Vigneault; William Zerges
Journal:  Front Plant Sci       Date:  2016-06-14       Impact factor: 5.753

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