Literature DB >> 12659212

Reduction of chemical formulas from the isotopic peak distributions of high-resolution mass spectra.

Stilianos G Roussis1, Richard Proulx.   

Abstract

A method has been developed for the reduction of the chemical formulas of compounds in complex mixtures from the isotopic peak distributions of high-resolution mass spectra. The method is based on the principle that the observed isotopic peak distribution of a mixture of compounds is a linear combination of the isotopic peak distributions of the individual compounds in the mixture. All possible chemical formulas that meet specific criteria (e.g., type and number of atoms in structure, limits of unsaturation, etc.) are enumerated, and theoretical isotopic peak distributions are generated for each formula. The relative amount of each formula is obtained from the accurately measured isotopic peak distribution and the calculated isotopic peak distributions of all candidate formulas. The formulas of compounds in simple spectra, where peak components are fully resolved, are rapidly determined by direct comparison of the calculated and experimental isotopic peak distributions. The singular value decomposition linear algebra method is used to determine the contributions of compounds in complex spectra containing unresolved peak components. The principles of the approach and typical application examples are presented. The method is most useful for the characterization of complex spectra containing partially resolved peaks and structures with multiisotopic elements.

Year:  2003        PMID: 12659212     DOI: 10.1021/ac020516w

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  13 in total

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Authors:  Juris Meija; Joseph A Caruso
Journal:  J Am Soc Mass Spectrom       Date:  2004-05       Impact factor: 3.109

2.  An efficient method to calculate the aggregated isotopic distribution and exact center-masses.

Authors:  Jürgen Claesen; Piotr Dittwald; Tomasz Burzykowski; Dirk Valkenborg
Journal:  J Am Soc Mass Spectrom       Date:  2012-02-15       Impact factor: 3.109

3.  Efficient calculation of accurate masses of isotopic peaks.

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Journal:  J Am Soc Mass Spectrom       Date:  2006-02-03       Impact factor: 3.109

4.  Efficient calculation of exact mass isotopic distributions.

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Journal:  J Am Soc Mass Spectrom       Date:  2007-05-24       Impact factor: 3.109

5.  High-precision frequency measurements: indispensable tools at the core of the molecular-level analysis of complex systems.

Authors:  N Hertkorn; C Ruecker; M Meringer; R Gugisch; M Frommberger; E M Perdue; M Witt; P Schmitt-Kopplin
Journal:  Anal Bioanal Chem       Date:  2007-10-09       Impact factor: 4.142

6.  Hydrogen radical removal causes complex overlapping isotope patterns of aromatic carboxylic acids in negative-ion matrix-assisted laser desorption/ionization mass spectrometry.

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Journal:  Mass Spectrom (Tokyo)       Date:  2012-07-20

7.  Calculation of the isotope cluster for polypeptides by probability grouping.

Authors:  Matthew T Olson; Alfred L Yergey
Journal:  J Am Soc Mass Spectrom       Date:  2008-10-17       Impact factor: 3.109

8.  Comment on "Computation of isotopic peak center-mass distribution by fourier transform".

Authors:  Han Hu; Piotr Dittwald; Joseph Zaia; Dirk Valkenborg
Journal:  Anal Chem       Date:  2013-12-04       Impact factor: 6.986

9.  NITPICK: peak identification for mass spectrometry data.

Authors:  Bernhard Y Renard; Marc Kirchner; Hanno Steen; Judith A J Steen; Fred A Hamprecht
Journal:  BMC Bioinformatics       Date:  2008-08-28       Impact factor: 3.169

10.  Computational mass spectrometry for small molecules.

Authors:  Kerstin Scheubert; Franziska Hufsky; Sebastian Böcker
Journal:  J Cheminform       Date:  2013-03-01       Impact factor: 5.514

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