Literature DB >> 12656153

Marinithermus hydrothermalis gen. nov., sp. nov., a strictly aerobic, thermophilic bacterium from a deep-sea hydrothermal vent chimney.

Yoshihiko Sako1, Satoshi Nakagawa1, Ken Takai2, Koki Horikoshi2.   

Abstract

A novel thermophilic marine bacterium, designated strain T1T, was isolated from a deep-sea hydrothermal vent chimney sample collected from the Suiyo Seamount in the Izu-Bonin Arc, Japan, at a depth of 1,385 m. Cells of strain T1T were rod-shaped, occurring in pairs or filamentous, and stained Gram-negative. Growth was observed between 50.0 and 72.5 degrees C (optimum 67.5 degrees C; 30 min doubling time) and at pH 6.25-7.75 (optimum pH 7.00). The isolate absolutely required NaCl, at a concentration of 0.5-4.5% (optimum 30%). It was a strictly aerobic heterotroph capable of growing solely on complex organic substrates such as yeast extract, tryptone and Casamino acids, utilizing glutamate, proline, serine, cellobiose, trehalose, sucrose, acetate and pyruvate as complementary substrates. The G+C content of the genomic DNA was 68.6 mol%. The 16S rRNA gene sequence of the isolate was most similar to those from members of the genus Thermus, but the isolate was distantly related to them at the genus level (<90%). In addition, phylogenetic analysis indicated that the isolate was on a novel lineage, deeply branched prior to divergence of the genus Thermus. On the basis of phylogenetic analysis and physiological traits of the isolate, it should be described as a member of a novel genus distinct from the previously described genus Thermus. The name Marinithermus gen. nov. is proposed, with Marinithermus hydrothermalis gen. nov., sp. nov. as the type species. The type strain of M. hydrothermalis gen. nov., sp. nov. is strain T1T (=JCM 11576T =DSM 14884T).

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Year:  2003        PMID: 12656153     DOI: 10.1099/ijs.0.02364-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  10 in total

Review 1.  Recent developments in the thermophilic microbiology of deep-sea hydrothermal vents.

Authors:  Margarita L Miroshnichenko; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2006-01-18       Impact factor: 2.395

2.  Microbial community in black rust exposed to hot ridge flank crustal fluids.

Authors:  Satoshi Nakagawa; Fumio Inagaki; Yohey Suzuki; Bjørn Olav Steinsbu; Mark Alexander Lever; Ken Takai; Bert Engelen; Yoshihiko Sako; Charles Geoffrey Wheat; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2006-08-21       Impact factor: 4.792

Review 3.  Microbial ecology of the dark ocean above, at, and below the seafloor.

Authors:  Beth N Orcutt; Jason B Sylvan; Nina J Knab; Katrina J Edwards
Journal:  Microbiol Mol Biol Rev       Date:  2011-06       Impact factor: 11.056

Review 4.  Thermostable marine microbial proteases for industrial applications: scopes and risks.

Authors:  Noora Barzkar; Ahmad Homaei; Roohullah Hemmati; Seema Patel
Journal:  Extremophiles       Date:  2018-02-13       Impact factor: 2.395

Review 5.  Bacterial diversity in 110 thermal hot springs of Indian Himalayan Region (IHR).

Authors:  Jagdish Verma; Anuradha Sourirajan; Kamal Dev
Journal:  3 Biotech       Date:  2022-08-21       Impact factor: 2.893

6.  Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan.

Authors:  Hisako Hirayama; Michinari Sunamura; Ken Takai; Takuro Nunoura; Takuro Noguchi; Hanako Oida; Yasuo Furushima; Hiroyuki Yamamoto; Tamotsu Oomori; Koki Horikoshi
Journal:  Appl Environ Microbiol       Date:  2007-10-05       Impact factor: 4.792

7.  Complete genome sequence of Oceanithermus profundus type strain (506).

Authors:  Amrita Pati; Xiaojing Zhang; Alla Lapidus; Matt Nolan; Susan Lucas; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Roxane Tapia; Cliff Han; Lynne Goodwin; Sam Pitluck; Konstantinos Liolios; Ioanna Pagani; Natalia Ivanova; Konstantinos Mavromatis; Amy Chen; Krishna Palaniappan; Loren Hauser; Cynthia D Jeffries; Evelyne-Marie Brambilla; Alina Röhl; Romano Mwirichia; Manfred Rohde; Brian J Tindall; Johannes Sikorski; Reinhard Wirth; Markus Göker; Tanja Woyke; John C Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Miriam Land
Journal:  Stand Genomic Sci       Date:  2011-04-29

8.  Is the genetic landscape of the deep subsurface biosphere affected by viruses?

Authors:  Rika E Anderson; William J Brazelton; John A Baross
Journal:  Front Microbiol       Date:  2011-11-09       Impact factor: 5.640

9.  Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney.

Authors:  Alex Copeland; Wei Gu; Montri Yasawong; Alla Lapidus; Susan Lucas; Shweta Deshpande; Ioanna Pagani; Roxanne Tapia; Jan-Fang Cheng; Lynne A Goodwin; Sam Pitluck; Konstantinos Liolios; Natalia Ivanova; Konstantinos Mavromatis; Natalia Mikhailova; Amrita Pati; Amy Chen; Krishna Palaniappan; Miriam Land; Chongle Pan; Evelyne-Marie Brambilla; Manfred Rohde; Brian J Tindall; Johannes Sikorski; Markus Göker; John C Detter; James Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-03-05

10.  Crystal structures of a dodecameric multicopper oxidase from Marinithermus hydrothermalis.

Authors:  Joseph L Paavola; Umberto Battistin; Craig M Ogata; Millie M Georgiadis
Journal:  Acta Crystallogr D Struct Biol       Date:  2021-09-29       Impact factor: 5.699

  10 in total

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