Literature DB >> 12647397

Prediction of protein-protein interactions from evolutionary information.

Alfonso Valencia1, Florencio Pazos.   

Abstract

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Year:  2003        PMID： 12647397

Source DB:  PubMed          Journal:  Methods Biochem Anal        ISSN： 0076-6941


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  14 in total

1.  Predicting protein-protein interaction by searching evolutionary tree automorphism space.

Authors:  Raja Jothi; Maricel G Kann; Teresa M Przytycka
Journal:  Bioinformatics       Date:  2005-06       Impact factor: 6.937

2.  An algorithm for predicting protein-protein interaction sites: Abnormally exposed amino acid residues and secondary structure elements.

Authors:  Jemima Hoskins; Simon Lovell; Tom L Blundell
Journal:  Protein Sci       Date:  2006-05       Impact factor: 6.725

3.  The human protein coevolution network.

Authors:  Elisabeth R M Tillier; Robert L Charlebois
Journal:  Genome Res       Date:  2009-08-20       Impact factor: 9.043

4.  Characterization and prediction of protein-protein interactions within and between complexes.

Authors:  Einat Sprinzak; Yael Altuvia; Hanah Margalit
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-26       Impact factor: 11.205

5.  A new, fast algorithm for detecting protein coevolution using maximum compatible cliques.

Authors:  Alex Rodionov; Alexandr Bezginov; Jonathan Rose; Elisabeth Rm Tillier
Journal:  Algorithms Mol Biol       Date:  2011-06-14       Impact factor: 1.405

6.  STRING: known and predicted protein-protein associations, integrated and transferred across organisms.

Authors:  Christian von Mering; Lars J Jensen; Berend Snel; Sean D Hooper; Markus Krupp; Mathilde Foglierini; Nelly Jouffre; Martijn A Huynen; Peer Bork
Journal:  Nucleic Acids Res       Date:  2005-01-01       Impact factor: 16.971

7.  Evolution of proteins and proteomes: a phylogenetics approach.

Authors:  Toni Gabaldón
Journal:  Evol Bioinform Online       Date:  2007-02-24       Impact factor: 1.625

8.  Chapter 4: Protein interactions and disease.

Authors:  Mileidy W Gonzalez; Maricel G Kann
Journal:  PLoS Comput Biol       Date:  2012-12-27       Impact factor: 4.475

9.  Homology modelling of protein-protein complexes: a simple method and its possibilities and limitations.

Authors:  Guillaume Launay; Thomas Simonson
Journal:  BMC Bioinformatics       Date:  2008-10-09       Impact factor: 3.169

10.  Recognizing protein-protein interfaces with empirical potentials and reduced amino acid alphabets.

Authors:  Guillaume Launay; Raul Mendez; Shoshana Wodak; Thomas Simonson
Journal:  BMC Bioinformatics       Date:  2007-07-27       Impact factor: 3.169
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