Literature DB >> 12644965

Estimation and testing of parent-of-origin effects for quantitative traits.

John C Whittaker1, Neda Gharani, Peter Hindmarsh, Mark I McCarthy.   

Abstract

Recent progress in developing family-based association methods has extended their use to the analysis of quantitative traits in the offspring and to the estimation, for dichotomous traits, of the relative contribution of genetic and environmental mechanisms for parent-of-origin effects. However, many traits of interest are not naturally measured on a binary scale yet are suspected or known to be influenced by imprinted genes, and there is consequent interest in seeking evidence for parent-of-origin effects at these loci. Here we show how simple linear models can be used to estimate these parent-of-origin effects for a broad class of phenotypes; in particular, normally distributed quantitative traits are easily dealt with.

Mesh:

Year:  2003        PMID: 12644965      PMCID: PMC1180334          DOI: 10.1086/374382

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  15 in total

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Authors:  C R Weinberg
Journal:  Am J Hum Genet       Date:  1999-07       Impact factor: 11.025

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Authors:  J C Whittaker; A P Morris
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4.  A log-linear approach to case-parent-triad data: assessing effects of disease genes that act either directly or through maternal effects and that may be subject to parental imprinting.

Authors:  C R Weinberg; A J Wilcox; R T Lie
Journal:  Am J Hum Genet       Date:  1998-04       Impact factor: 11.025

Review 5.  The TDT and other family-based tests for linkage disequilibrium and association.

Authors:  R S Spielman; W J Ewens
Journal:  Am J Hum Genet       Date:  1996-11       Impact factor: 11.025

6.  General score tests for associations of genetic markers with disease using cases and their parents.

Authors:  D J Schaid
Journal:  Genet Epidemiol       Date:  1996       Impact factor: 2.135

7.  Association of the INS VNTR with size at birth. ALSPAC Study Team. Avon Longitudinal Study of Pregnancy and Childhood.

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Journal:  Nat Genet       Date:  1998-05       Impact factor: 38.330

8.  Transmission-disequilibrium tests for quantitative traits.

Authors:  D B Allison
Journal:  Am J Hum Genet       Date:  1997-03       Impact factor: 11.025

9.  Paternal transmission of the very common class I INS VNTR alleles predisposes to childhood obesity.

Authors:  C Le Stunff; D Fallin; P Bougnères
Journal:  Nat Genet       Date:  2001-09       Impact factor: 38.330

Review 10.  The fetal insulin hypothesis: an alternative explanation of the association of low birthweight with diabetes and vascular disease.

Authors:  A T Hattersley; J E Tooke
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  10 in total

1.  Detection of parent-of-origin effects for quantitative traits in complete and incomplete nuclear families with multiple children.

Authors:  Feng He; Ji-Yuan Zhou; Yue-Qing Hu; Fengzhu Sun; Jingyuan Yang; Shili Lin; Wing Kam Fung
Journal:  Am J Epidemiol       Date:  2011-06-01       Impact factor: 4.897

2.  Methods for detecting interactions between imprinted genes and environmental exposures using birth cohort designs with mother-offspring pairs.

Authors:  Shuang Wang; Zhaoxia Yu; Rachel L Miller; Deliang Tang; Frederica P Perera
Journal:  Hum Hered       Date:  2011-07-20       Impact factor: 0.444

3.  Detection of parent-of-origin effects for quantitative traits using general pedigree data.

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4.  A powerful test of parent-of-origin effects for quantitative traits using haplotypes.

Authors:  Rui Feng; Yinghua Wu; Gun Ho Jang; Jose M Ordovas; Donna Arnett
Journal:  PLoS One       Date:  2011-12-13       Impact factor: 3.240

5.  An efficient study design to test parent-of-origin effects in family trios.

Authors:  Xiaobo Yu; Gao Chen; Rui Feng
Journal:  Genet Epidemiol       Date:  2017-07-20       Impact factor: 2.135

6.  A powerful genome-wide feasible approach to detect parent-of-origin effects in studies of quantitative traits.

Authors:  Nadezhda M Belonogova; Tatiana I Axenovich; Yurii S Aulchenko
Journal:  Eur J Hum Genet       Date:  2009-10-07       Impact factor: 4.246

7.  Common polymorphism in H19 associated with birthweight and cord blood IGF-II levels in humans.

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Journal:  BMC Genet       Date:  2005-05-10       Impact factor: 2.797

8.  Quantitative trait association in parent offspring trios: Extension of case/pseudocontrol method and comparison of prospective and retrospective approaches.

Authors:  Eleanor Wheeler; Heather J Cordell
Journal:  Genet Epidemiol       Date:  2007-12       Impact factor: 2.135

9.  The architecture of parent-of-origin effects in mice.

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Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

10.  Investigation of parent-of-origin effects induced by fenofibrate treatment on triglycerides levels.

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  10 in total

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