Literature DB >> 12625627

Protein dynamics from solution NMR: theory and applications.

James G Kempf1, J Patrick Loria.   

Abstract

Solution nuclear magnetic resonance (NMR) spectroscopy is unique in its ability to elucidate the details of atomic-level structural and dynamical properties of biological macromolecules under native-like conditions. Recent advances in NMR techniques and protein sample preparation now allow comprehensive investigation of protein dynamics over timescales ranging 14 orders of magnitude at nearly every atomic site. Thus, solution NMR is poised to reveal aspects of the physico-chemical properties that govern the ensemble distribution of protein conformers and the dynamics of their interconversion. We review these advances as well as their recent application to the study of proteins.

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Year:  2003        PMID: 12625627     DOI: 10.1385/cbb:37:3:187

Source DB:  PubMed          Journal:  Cell Biochem Biophys        ISSN: 1085-9195            Impact factor:   2.194


  30 in total

1.  GUARDD: user-friendly MATLAB software for rigorous analysis of CPMG RD NMR data.

Authors:  Ian R Kleckner; Mark P Foster
Journal:  J Biomol NMR       Date:  2011-12-11       Impact factor: 2.835

2.  Applications of NMR spin relaxation methods for measuring biological motions.

Authors:  Guruvasuthevan R Thuduppathy; R Blake Hill
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

Review 3.  Solution NMR Spectroscopy for the Study of Enzyme Allostery.

Authors:  George P Lisi; J Patrick Loria
Journal:  Chem Rev       Date:  2016-01-06       Impact factor: 60.622

4.  Measurement of 15N relaxation in the detergent-solubilized tetrameric KcsA potassium channel.

Authors:  Jordan H Chill; John M Louis; James L Baber; Ad Bax
Journal:  J Biomol NMR       Date:  2006-09-20       Impact factor: 2.835

5.  The cavity-chaperone Skp protects its substrate from aggregation but allows independent folding of substrate domains.

Authors:  Troy A Walton; Cristina M Sandoval; C Andrew Fowler; Arthur Pardi; Marcelo C Sousa
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-30       Impact factor: 11.205

6.  NMR studies of the dynamics of nitrophorin 2 bound to nitric oxide.

Authors:  Dhanasekaran Muthu; Robert E Berry; Hongjun Zhang; F Ann Walker
Journal:  Biochemistry       Date:  2013-10-30       Impact factor: 3.162

7.  Effect of subdomain interactions on methyl group dynamics in the hydrophobic core of villin headpiece protein.

Authors:  Liliya Vugmeyster; Tien Do; Dmitry Ostrovsky; Riqianq Fu
Journal:  Protein Sci       Date:  2013-12-03       Impact factor: 6.725

8.  Hydration dependent dynamics in RNA.

Authors:  Greg L Olsen; Michael F Bardaro; Dorothy C Echodu; Gary P Drobny; Gabriele Varani
Journal:  J Biomol NMR       Date:  2009-08-08       Impact factor: 2.835

Review 9.  Using NMR spectroscopy to elucidate the role of molecular motions in enzyme function.

Authors:  George P Lisi; J Patrick Loria
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2015-12-07       Impact factor: 9.795

10.  A comparison of BRCT domains involved in nonhomologous end-joining: introducing the solution structure of the BRCT domain of polymerase lambda.

Authors:  Geoffrey A Mueller; Andrea F Moon; Eugene F Derose; Jody M Havener; Dale A Ramsden; Lars C Pedersen; Robert E London
Journal:  DNA Repair (Amst)       Date:  2008-06-26
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