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Literature DB >> 12620878

Comparison of ribotyping and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals.

C Andrew Carson¹, Brian L Shear, Mark R Ellersieck, Jennifer D Schnell.

Abstract

This report compares the performances of two popular genotypic methods used for tracking the sources of fecal pollution in water, ribotyping and repetitive extragenic palindromic-PCR (rep-PCR). The rep-PCR was more accurate, reproducible, and efficient in associating DNA fingerprints of fecal Escherichia coli with human and animal hosts of origin.

Entities: Chemical Species

Mesh：

Substances：
DNA, Bacterial

Year: 2003 PMID： 12620878 PMCID： PMC150071 DOI： 10.1128/AEM.69.3.1836-1839.2003

Source DB: PubMed Journal: Appl Environ Microbiol ISSN： 0099-2240 Impact factor: 4.792

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Authors: C A Carson; B L Shear; M R Ellersieck; A Asfaw
Journal: Appl Environ Microbiol Date: 2001-04 Impact factor: 4.792

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Review 2. Performance, design, and analysis in microbial source tracking studies.

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4. Cytotoxicity potential and genotypic characterization of Escherichia coli isolates from environmental and food sources.

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10. Forest fragmentation as cause of bacterial transmission among nonhuman primates, humans, and livestock, Uganda.

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