Literature DB >> 12620814

Microbial populations stimulated for hexavalent uranium reduction in uranium mine sediment.

Yohey Suzuki1, Shelly D Kelly, Kenneth M Kemner, Jillian F Banfield.   

Abstract

Uranium-contaminated sediment and water collected from an inactive uranium mine were incubated anaerobically with organic substrates. Stimulated microbial populations removed U almost entirely from solution within 1 month. X-ray absorption near-edge structure analysis showed that U(VI) was reduced to U(IV) during the incubation. Observations by transmission electron microscopy, selected area diffraction pattern analysis, and energy-dispersive X-ray spectroscopic analysis showed two distinct types of prokaryotic cells that precipitated only a U(IV) mineral uraninite (UO(2)) or both uraninite and metal sulfides. Prokaryotic cells associated with uraninite and metal sulfides were inferred to be sulfate-reducing bacteria. Phylogenetic analysis of 16S ribosomal DNA obtained from the original and incubated sediments revealed that microbial populations were changed from microaerophilic Proteobacteria to anaerobic low-G+C gram-positive sporeforming bacteria by the incubation. Forty-two out of 94 clones from the incubated sediment were related to sulfate-reducing Desulfosporosinus spp., and 23 were related to fermentative Clostridium spp. The results suggest that, if in situ bioremediation were attempted in the uranium mine ponds, Desulfosporosinus spp. would be a major contributor to U(VI) and sulfate reduction and Clostridium spp. to U(VI) reduction.

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Year:  2003        PMID: 12620814      PMCID: PMC150047          DOI: 10.1128/AEM.69.3.1337-1346.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  28 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

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Authors:  J D Coates; V K Bhupathiraju; L A Achenbach; M J Mclnerney; D R Lovley
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Authors:  J K Fredrickson; F J Brockman; D J Workman; S W Li; T O Stevens
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4.  Phylogenetic characterization of several para- and meta-PCB dechlorinating Clostridium species: 16s rDNA sequence analyses.

Authors:  L Hou; S K Dutta
Journal:  Lett Appl Microbiol       Date:  2000-03       Impact factor: 2.858

5.  Carbohydrate oxidation coupled to Fe(III) reduction, a novel form of anaerobic metabolism.

Authors:  J D Coates; T Councell; D J Ellis; D R Lovley
Journal:  Anaerobe       Date:  1998-12       Impact factor: 3.331

Review 6.  Bioremediation of organic and metal contaminants with dissimilatory metal reduction.

Authors:  D R Lovley
Journal:  J Ind Microbiol       Date:  1995-02

7.  Confirmation of Thiobacillus denitrificans as a species of the genus Thiobacillus, in the beta-subclass of the Proteobacteria, with strain NCIMB 9548 as the type strain.

Authors:  D P Kelly; A P Wood
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8.  Reduction of Fe(III), Mn(IV), and toxic metals at 100 degrees C by Pyrobaculum islandicum.

Authors:  K Kashefi; D R Lovley
Journal:  Appl Environ Microbiol       Date:  2000-03       Impact factor: 4.792

9.  Dissimilatory reduction of Fe(III) and other electron acceptors by a Thermus isolate.

Authors:  T L Kieft; J K Fredrickson; T C Onstott; Y A Gorby; H M Kostandarithes; T J Bailey; D W Kennedy; S W Li; A E Plymale; C M Spadoni; M S Gray
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

10.  Reduction of hexavalent uranium from organic complexes by sulfate- and iron-reducing bacteria.

Authors:  R Ganesh; K G Robinson; G D Reed; G S Sayler
Journal:  Appl Environ Microbiol       Date:  1997-11       Impact factor: 4.792

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  28 in total

1.  Change in bacterial community structure during in situ biostimulation of subsurface sediment cocontaminated with uranium and nitrate.

Authors:  Nadia N North; Sherry L Dollhopf; Lainie Petrie; Jonathan D Istok; David L Balkwill; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

2.  Significant association between sulfate-reducing bacteria and uranium-reducing microbial communities as revealed by a combined massively parallel sequencing-indicator species approach.

Authors:  Erick Cardenas; Wei-Min Wu; Mary Beth Leigh; Jack Carley; Sue Carroll; Terry Gentry; Jian Luo; David Watson; Baohua Gu; Matthew Ginder-Vogel; Peter K Kitanidis; Philip M Jardine; Jizhong Zhou; Craig S Criddle; Terence L Marsh; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2010-08-20       Impact factor: 4.792

3.  Anaerobic, nitrate-dependent oxidation of U(IV) oxide minerals by the chemolithoautotrophic bacterium Thiobacillus denitrificans.

Authors:  Harry R Beller
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

4.  Application of a high-density oligonucleotide microarray approach to study bacterial population dynamics during uranium reduction and reoxidation.

Authors:  Eoin L Brodie; Todd Z Desantis; Dominique C Joyner; Seung M Baek; Joern T Larsen; Gary L Andersen; Terry C Hazen; Paul M Richardson; Donald J Herman; Tetsu K Tokunaga; Jiamin M Wan; Mary K Firestone
Journal:  Appl Environ Microbiol       Date:  2006-09       Impact factor: 4.792

5.  Whole-genome transcriptional analysis of heavy metal stresses in Caulobacter crescentus.

Authors:  Ping Hu; Eoin L Brodie; Yohey Suzuki; Harley H McAdams; Gary L Andersen
Journal:  J Bacteriol       Date:  2005-12       Impact factor: 3.490

6.  Identification and isolation of a Castellaniella species important during biostimulation of an acidic nitrate- and uranium-contaminated aquifer.

Authors:  Anne M Spain; Aaron D Peacock; Jonathan D Istok; Mostafa S Elshahed; Fares Z Najar; Bruce A Roe; David C White; Lee R Krumholz
Journal:  Appl Environ Microbiol       Date:  2007-06-08       Impact factor: 4.792

7.  Microbial community dynamics in uranium contaminated subsurface sediments under biostimulated conditions with high nitrate and nickel pressure.

Authors:  David Moreels; Garry Crosson; Craig Garafola; Denise Monteleone; Safiyh Taghavi; Jeffrey P Fitts; Daniel van der Lelie
Journal:  Environ Sci Pollut Res Int       Date:  2008-08-19       Impact factor: 4.223

8.  Direct microbial reduction and subsequent preservation of uranium in natural near-surface sediment.

Authors:  Yohey Suzuki; Shelly D Kelly; Kenneth M Kemner; Jillian F Banfield
Journal:  Appl Environ Microbiol       Date:  2005-04       Impact factor: 4.792

9.  Microbial communities in contaminated sediments, associated with bioremediation of uranium to submicromolar levels.

Authors:  Erick Cardenas; Wei-Min Wu; Mary Beth Leigh; Jack Carley; Sue Carroll; Terry Gentry; Jian Luo; David Watson; Baohua Gu; Matthew Ginder-Vogel; Peter K Kitanidis; Philip M Jardine; Jizhong Zhou; Craig S Criddle; Terence L Marsh; James M Tiedje
Journal:  Appl Environ Microbiol       Date:  2008-05-02       Impact factor: 4.792

10.  Microbial diversity in uranium mining-impacted soils as revealed by high-density 16S microarray and clone library.

Authors:  Gurdeep Rastogi; Shariff Osman; Parag A Vaishampayan; Gary L Andersen; Larry D Stetler; Rajesh K Sani
Journal:  Microb Ecol       Date:  2010-01       Impact factor: 4.552

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