Literature DB >> 12612600

Priming the nucleosome: a role for HMGB proteins?

Andrew A Travers1.   

Abstract

The high-mobility-group B (HMGB) chromosomal proteins are characterized by the HMG box, a DNA-binding domain that both introduces a tight bend into DNA and binds preferentially to a variety of distorted DNA structures. The HMGB proteins seem to act primarily as architectural facilitators in the manipulation of nucleoprotein complexes; for example, in the assembly of complexes involved in recombination and transcription. Recent genetic and biochemical evidence suggests that these proteins can facilitate nucleosome remodelling. One mechanism by which HMGB proteins could prime the nucleosome for migration is to loosen the wrapped DNA and so enhance accessibility to chromatin-remodelling complexes and possibly also to transcription factors. By constraining a tight loop of untwisted DNA at the edge of a nucleosome, an HMGB protein could induce movements in the contacts between certain core histones that would result in an overall change in nucleosome structure.

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Year:  2003        PMID: 12612600      PMCID: PMC1315838          DOI: 10.1038/sj.embor.embor741

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  42 in total

1.  Mobility of positioned nucleosomes on 5 S rDNA.

Authors:  S Pennings; G Meersseman; E M Bradbury
Journal:  J Mol Biol       Date:  1991-07-05       Impact factor: 5.469

2.  The acidic tail of the high mobility group protein HMG-D modulates the structural selectivity of DNA binding.

Authors:  D Payet; A Travers
Journal:  J Mol Biol       Date:  1997-02-14       Impact factor: 5.469

3.  Characterization of a high mobility group 1/2 homolog in yeast.

Authors:  J Lu; R Kobayashi; S J Brill
Journal:  J Biol Chem       Date:  1996-12-27       Impact factor: 5.157

4.  Yeast global transcriptional regulators Sin4 and Rgr1 are components of mediator complex/RNA polymerase II holoenzyme.

Authors:  Y Li; S Bjorklund; Y W Jiang; Y J Kim; W S Lane; D J Stillman; R D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

5.  Global alterations in chromatin accessibility associated with loss of SIN4 function.

Authors:  T Macatee; Y W Jiang; D J Stillman; S Y Roth
Journal:  Nucleic Acids Res       Date:  1997-03-15       Impact factor: 16.971

6.  Yeast HMG proteins NHP6A/B potentiate promoter-specific transcriptional activation in vivo and assembly of preinitiation complexes in vitro.

Authors:  T T Paull; M Carey; R C Johnson
Journal:  Genes Dev       Date:  1996-11-01       Impact factor: 11.361

7.  Nucleosome loss activates CUP1 and HIS3 promoters to fully induced levels in the yeast Saccharomyces cerevisiae.

Authors:  L K Durrin; R K Mann; M Grunstein
Journal:  Mol Cell Biol       Date:  1992-04       Impact factor: 4.272

8.  Evidence for a shared structural role for HMG1 and linker histones B4 and H1 in organizing chromatin.

Authors:  K Nightingale; S Dimitrov; R Reeves; A P Wolffe
Journal:  EMBO J       Date:  1996-02-01       Impact factor: 11.598

9.  The DNA bend angle and binding affinity of an HMG box increased by the presence of short terminal arms.

Authors:  M Lnenicek-Allen; C M Read; C Crane-Robinson
Journal:  Nucleic Acids Res       Date:  1996-03-15       Impact factor: 16.971

10.  Genetic and physical interactions between yeast RGR1 and SIN4 in chromatin organization and transcriptional regulation.

Authors:  Y W Jiang; P R Dohrmann; D J Stillman
Journal:  Genetics       Date:  1995-05       Impact factor: 4.562

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  79 in total

1.  The interaction with HMG20a/b proteins suggests a potential role for beta-dystrobrevin in neuronal differentiation.

Authors:  Benedetta Artegiani; Catherine Labbaye; Antonella Sferra; Maria Teresa Quaranta; Paola Torreri; Gianfranco Macchia; Marina Ceccarini; Tamara C Petrucci; Pompeo Macioce
Journal:  J Biol Chem       Date:  2010-06-08       Impact factor: 5.157

2.  Intracellular HMGB1 negatively regulates efferocytosis.

Authors:  Sami Banerjee; Andressa de Freitas; Arnaud Friggeri; Jaroslaw W Zmijewski; Gang Liu; Edward Abraham
Journal:  J Immunol       Date:  2011-09-28       Impact factor: 5.422

3.  Arabidopsis chromatin-associated HMGA and HMGB use different nuclear targeting signals and display highly dynamic localization within the nucleus.

Authors:  Dorte Launholt; Thomas Merkle; Andreas Houben; Alexander Schulz; Klaus D Grasser
Journal:  Plant Cell       Date:  2006-11-17       Impact factor: 11.277

4.  The histone fold subunits of Drosophila CHRAC facilitate nucleosome sliding through dynamic DNA interactions.

Authors:  Klaus F Hartlepp; Carlos Fernández-Tornero; Anton Eberharter; Tim Grüne; Christoph W Müller; Peter B Becker
Journal:  Mol Cell Biol       Date:  2005-11       Impact factor: 4.272

5.  Dual binding modes for an HMG domain from human HMGB2 on DNA.

Authors:  Micah McCauley; Philip R Hardwidge; L James Maher; Mark C Williams
Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

6.  An HMG protein, Hmo1, associates with promoters of many ribosomal protein genes and throughout the rRNA gene locus in Saccharomyces cerevisiae.

Authors:  Daniel B Hall; Joseph T Wade; Kevin Struhl
Journal:  Mol Cell Biol       Date:  2006-05       Impact factor: 4.272

7.  Transcriptome and proteome profiling to understanding the biology of high productivity CHO cells.

Authors:  Peter Morin Nissom; Arleen Sanny; Yee Jiun Kok; Yeo Thong Hiang; Song Hui Chuah; Tan Kher Shing; Yih Yean Lee; Kathy Tin Kam Wong; Wei-Shou Hu; Miranda Yap Gek Sim; Robin Philp
Journal:  Mol Biotechnol       Date:  2006-10       Impact factor: 2.695

8.  H3 and H4 histone tails play a central role in the interactions of recombinant NCPs.

Authors:  Aurélie Bertin; Madalena Renouard; Jan Skov Pedersen; Françoise Livolant; Dominique Durand
Journal:  Biophys J       Date:  2007-01-19       Impact factor: 4.033

9.  Enhancement of DNA flexibility in vitro and in vivo by HMGB box A proteins carrying box B residues.

Authors:  Nadia T Sebastian; Emily M Bystry; Nicole A Becker; L James Maher
Journal:  Biochemistry       Date:  2009-03-17       Impact factor: 3.162

10.  High-mobility group box 2 (HMGB2) modulates radioresponse and is downregulated by p53 in colorectal cancer cell.

Authors:  Young-Joo Shin; Mi-Sook Kim; Moon-Sun Kim; Joonseok Lee; Miae Kang; Jae-Hoon Jeong
Journal:  Cancer Biol Ther       Date:  2012-12-19       Impact factor: 4.742

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