Literature DB >> 12591897

Molecular cloning of endo-beta-D-1,4-glucanase genes, rce1, rce2, and rce3, from Rhizopus oryzae.

Tatsuki Moriya1, Koichiro Murashima, Akitaka Nakane, Koji Yanai, Naomi Sumida, Jinichiro Koga, Takeshi Murakami, Toshiaki Kono.   

Abstract

Three endoglucanase genes, designated the rce1, rce2, and rce3 genes, were isolated from Rhizopus oryzae as the first cellulase genes from the subdivision ZYGOMYCOTA: All the amino acid sequences deduced from the rce1, rce2, and rce3 genes consisted of three distinct domains: cellulose binding domains, linker domains, and catalytic domains belonging to glycosyl hydrolase family 45. The rce3 gene had two tandem repeated sequences of cellulose binding domains, while rce1 and rce2 had only one. rce1, rce2, and rce3 had various lengths of linker sequences.

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Year:  2003        PMID: 12591897      PMCID: PMC148074          DOI: 10.1128/JB.185.5.1749-1756.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  21 in total

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Authors:  W H Schwarz
Journal:  Appl Microbiol Biotechnol       Date:  2001-09       Impact factor: 4.813

2.  Updating the sequence-based classification of glycosyl hydrolases.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1996-06-01       Impact factor: 3.857

3.  The N-terminal region of an endoglucanase from Pseudomonas fluorescens subspecies cellulosa constitutes a cellulose-binding domain that is distinct from the catalytic centre.

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Journal:  Mol Microbiol       Date:  1990-05       Impact factor: 3.501

Review 4.  Cellulose hydrolysis by bacteria and fungi.

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Journal:  Adv Microb Physiol       Date:  1995       Impact factor: 3.517

5.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

6.  Evidence that endo-1,4-beta-glucanases act on cellulose in suspension-cultured poplar cells.

Authors:  Y Ohmiya; M Samejima; M Shiroishi; Y Amano; T Kanda; F Sakai; T Hayashi
Journal:  Plant J       Date:  2000-10       Impact factor: 6.417

7.  Homologous domains in Trichoderma reesei cellulolytic enzymes: gene sequence and expression of cellobiohydrolase II.

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Journal:  Gene       Date:  1987       Impact factor: 3.688

8.  Cellulose and Xylan Utilisation in the Lower Termite Reticulitermes speratus.

Authors:  M SLAYTOR; A SUGIMOTO; J -I. AZUMA; K MURASHIMA; T INOUE
Journal:  J Insect Physiol       Date:  1997-03       Impact factor: 2.354

9.  Structure and function of endoglucanase V.

Authors:  G J Davies; G G Dodson; R E Hubbard; S P Tolley; Z Dauter; K S Wilson; C Hjort; J M Mikkelsen; G Rasmussen; M Schülein
Journal:  Nature       Date:  1993-09-23       Impact factor: 49.962

10.  The use of conserved cellulase family-specific sequences to clone cellulase homologue cDNAs from Fusarium oxysporum.

Authors:  P O Sheppard; F J Grant; P J Oort; C A Sprecher; D C Foster; F S Hagen; A Upshall; G L McKnight; P J O'Hara
Journal:  Gene       Date:  1994-12-02       Impact factor: 3.688

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  7 in total

1.  Molecular cloning, purification, and characterization of a novel, acidic, pH-stable endoglucanase from Martelella mediterranea.

Authors:  Junli Dong; Yuzhi Hong; Zongze Shao; Ziduo Liu
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

2.  Alternative splicing produces two endoglucanases with one or two carbohydrate-binding modules in Mucor circinelloides.

Authors:  Yuko Baba; Atsushi Shimonaka; Jinichiro Koga; Hidetoshi Kubota; Toshiaki Kono
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

3.  Purification and characterization of a new family 45 endoglucanase, STCE1, from Staphylotrichum coccosporum and its overproduction in Humicola insolens.

Authors:  Jinichiro Koga; Yuko Baba; Atsushi Shimonaka; Tomoko Nishimura; Satoshi Hanamura; Toshiaki Kono
Journal:  Appl Environ Microbiol       Date:  2008-04-11       Impact factor: 4.792

4.  Expression and functional analysis of a glycoside hydrolase family 45 endoglucanase from Rhizopus stolonifer.

Authors:  Bin Tang; Yingying Zhang; Yaping Yang; Zhewei Song; Xianglin Li
Journal:  World J Microbiol Biotechnol       Date:  2014-08-28       Impact factor: 3.312

5.  Development of a system for integrative and stable transformation of the zygomycete Rhizopus oryzae by Agrobacterium-mediated DNA transfer.

Authors:  C B Michielse; K Salim; P Ragas; A F J Ram; B Kudla; B Jarry; P J Punt; C A M J J van den Hondel
Journal:  Mol Genet Genomics       Date:  2004-04-06       Impact factor: 3.291

6.  Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level.

Authors:  Evy Battaglia; Isabelle Benoit; Joost van den Brink; Ad Wiebenga; Pedro M Coutinho; Bernard Henrissat; Ronald P de Vries
Journal:  BMC Genomics       Date:  2011-01-17       Impact factor: 3.969

7.  A thermostable GH45 endoglucanase from yeast: impact of its atypical multimodularity on activity.

Authors:  Marie Couturier; Julia Feliu; Mireille Haon; David Navarro; Laurence Lesage-Meessen; Pedro M Coutinho; Jean-Guy Berrin
Journal:  Microb Cell Fact       Date:  2011-12-06       Impact factor: 5.328

  7 in total

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