Literature DB >> 12591891

DNA microarray analysis of redox-responsive genes in the genome of the cyanobacterium Synechocystis sp. strain PCC 6803.

Yukako Hihara1, Kintake Sonoike, Minoru Kanehisa, Masahiko Ikeuchi.   

Abstract

Whole-genome DNA microarrays were used to evaluate the effect of the redox state of the photosynthetic electron transport chain on gene expression in Synechocystis sp. strain PCC 6803. Two specific inhibitors of electron transport, 3-(3,4-dichlorophenyl)-1,1-dimethylurea (DCMU) and 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone (DBMIB), were added to the cultures, and changes in accumulation of transcripts were examined. About 140 genes were highlighted as reproducibly affected by the change in the redox state of the photosynthetic electron transport chain. It was shown that some stress-responsive genes but not photosynthetic genes were under the control of the redox state of the plastoquinone pool in Synechocystis sp. strain PCC 6803.

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Year:  2003        PMID： 12591891      PMCID： PMC148065          DOI： 10.1128/JB.185.5.1719-1725.2003

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  28 in total

1.  Photosynthetic electron transport controls degradation but not production of psbA transcripts in the cyanobacterium Synechocystis 6803.

Authors:  A Mohamed; C Jansson
Journal:  Plant Mol Biol       Date:  1991-05       Impact factor: 4.076

2.  Chaperonin genes of the Synechocystis PCC 6803 are differentially regulated under light-dark transition during heat stress.

Authors:  A Glatz; I Horváth; V Varvasovszki; E Kovács; Z Török; L Vigh
Journal:  Biochem Biophys Res Commun       Date:  1997-10-09       Impact factor: 3.575

3.  Photosynthetic electron transport regulates the expression of cytosolic ascorbate peroxidase genes in Arabidopsis during excess light stress.

Authors:  S Karpinski; C Escobar; B Karpinska; G Creissen; P M Mullineaux
Journal:  Plant Cell       Date:  1997-04       Impact factor: 11.277

4.  Electron transport controls transcription of the glutamine synthetase gene (glnA) from the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  J C Reyes; F J Florencio
Journal:  Plant Mol Biol       Date:  1995-02       Impact factor: 4.076

5.  Evidence for light/redox-regulated splicing of psbA pre-RNAs in Chlamydomonas chloroplasts.

Authors:  N N Deshpande; Y Bao; D L Herrin
Journal:  RNA       Date:  1997-01       Impact factor: 4.942

6.  Protein disulfide isomerase as a regulator of chloroplast translational activation.

Authors:  J Kim; S P Mayfield
Journal:  Science       Date:  1997-12-12       Impact factor: 47.728

7.  Light-induced expression of fatty acid desaturase genes.

Authors:  M Kis; O Zsiros; T Farkas; H Wada; F Nagy; Z Gombos
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

8.  Nitrogen availability and electron transport control the expression of glnB gene (encoding PII protein) in the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  M García-Domínguez; F J Florencio
Journal:  Plant Mol Biol       Date:  1997-12       Impact factor: 4.076

9.  Light intensity regulation of cab gene transcription is signaled by the redox state of the plastoquinone pool.

Authors:  J M Escoubas; M Lomas; J LaRoche; P G Falkowski
Journal:  Proc Natl Acad Sci U S A       Date:  1995-10-24       Impact factor: 11.205

10.  Transcriptional regulation of genes encoding subunits of photosystem I during acclimation to high-light conditions in Synechocystis sp. PCC 6803.

Authors:  Masayuki Muramatsu; Yukako Hihara
Journal:  Planta       Date:  2002-09-06       Impact factor: 4.116
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  48 in total

1.  Towards functional proteomics of membrane protein complexes in Synechocystis sp. PCC 6803.

Authors:  Mirkka Herranen; Natalia Battchikova; Pengpeng Zhang; Alexander Graf; Sari Sirpiö; Virpi Paakkarinen; Eva-Mari Aro
Journal:  Plant Physiol       Date:  2004-01       Impact factor: 8.340

2.  Consequences of a deletion in dspA on transcript accumulation in Synechocystis sp. strain PCC6803.

Authors:  Chao-Jung Tu; Jeffrey Shrager; Robert L Burnap; Bradley L Postier; Arthur R Grossman
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

3.  Genomic DNA microarray analysis: identification of new genes regulated by light color in the cyanobacterium Fremyella diplosiphon.

Authors:  Emily L Stowe-Evans; James Ford; David M Kehoe
Journal:  J Bacteriol       Date:  2004-07       Impact factor: 3.490

4.  The malic enzyme is required for optimal photoautotrophic growth of Synechocystis sp. strain PCC 6803 under continuous light but not under a diurnal light regimen.

Authors:  Terry M Bricker; Shulu Zhang; Susan M Laborde; Paul R Mayer; Laurie K Frankel; James V Moroney
Journal:  J Bacteriol       Date:  2004-12       Impact factor: 3.490

5.  Functions of the duplicated hik31 operons in central metabolism and responses to light, dark, and carbon sources in Synechocystis sp. strain PCC 6803.

Authors:  Sowmya Nagarajan; Debra M Sherman; Isaac Shaw; Louis A Sherman
Journal:  J Bacteriol       Date:  2011-11-11       Impact factor: 3.490

Review 6.  Acclimation to high-light conditions in cyanobacteria: from gene expression to physiological responses.

Authors:  Masayuki Muramatsu; Yukako Hihara
Journal:  J Plant Res       Date:  2011-10-18       Impact factor: 2.629

7.  The CopRS two-component system is responsible for resistance to copper in the cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Joaquín Giner-Lamia; Luis López-Maury; José C Reyes; Francisco J Florencio
Journal:  Plant Physiol       Date:  2012-06-19       Impact factor: 8.340

8.  FdC1, a novel ferredoxin protein capable of alternative electron partitioning, increases in conditions of acceptor limitation at photosystem I.

Authors:  Ingo Voss; Tatjana Goss; Emiko Murozuka; Bianca Altmann; Kirsty J McLean; Stephen E J Rigby; Andrew W Munro; Renate Scheibe; Toshiharu Hase; Guy T Hanke
Journal:  J Biol Chem       Date:  2010-10-21       Impact factor: 5.157

Review 9.  Why chloroplasts and mitochondria retain their own genomes and genetic systems: Colocation for redox regulation of gene expression.

Authors:  John F Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

10.  LdpA: a component of the circadian clock senses redox state of the cell.

Authors:  Natalia B Ivleva; Matthew R Bramlett; Paul A Lindahl; Susan S Golden
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598
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