Literature DB >> 12588867

Crystal structure of Thermotoga maritima alpha-glucosidase AglA defines a new clan of NAD+-dependent glycosidases.

Jacinta A Lodge1, Timm Maier, Wolfgang Liebl, Volker Hoffmann, Norbert Sträter.   

Abstract

Glycoside hydrolase family 4 represents an unusual group of glucosidases with a requirement for NAD+, divalent metal cations, and reducing conditions. The family is also unique in its inclusion of both alpha- and beta-specific enzymes. The alpha-glucosidase A, AglA, from Thermotoga maritima is a typical glycoside hydrolase family 4 enzyme, requiring NAD+ and Mn2+ as well as strongly reducing conditions for activity. Here we present the crystal structure of the protein complexed with NAD+ and maltose, refined at a resolution of 1.9 A. The NAD+ is bound to a typical Rossman fold NAD+-binding site, and the nicotinamide moiety is localized close to the maltose substrate. Within the active site the conserved Cys-174 and surrounding histidines are positioned to play a role in the hydrolysis reaction. The electron density maps indicate that Cys-174 is oxidized to a sulfinic acid. Most likely, the strongly reducing conditions are necessary to reduce the oxidized cysteine side chain. Notably, the canonical set of catalytic acidic residues common to other glucosidases is not present in the active site. This, combined with a high structural homology to NAD-dependent dehydrogenases, suggests an unusual and possibly unique mechanism of action for a glycoside-hydrolyzing enzyme.

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Year:  2003        PMID: 12588867     DOI: 10.1074/jbc.M211626200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  Characterization of maltase clusters in the genus Drosophila.

Authors:  Marek Gabriško; Stefan Janeček
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2.  Evolutionary history of eukaryotic α-glucosidases from the α-amylase family.

Authors:  Marek Gabriško
Journal:  J Mol Evol       Date:  2013-02-10       Impact factor: 2.395

3.  Replacement of the catalytic nucleophile aspartyl residue of dextran glucosidase by cysteine sulfinate enhances transglycosylation activity.

Authors:  Wataru Saburi; Momoko Kobayashi; Haruhide Mori; Masayuki Okuyama; Atsuo Kimura
Journal:  J Biol Chem       Date:  2013-09-19       Impact factor: 5.157

4.  High-throughput protein production for X-ray crystallography and use of size exclusion chromatography to validate or refute computational biological unit predictions.

Authors:  Daniel McMullan; Jaume M Canaves; Kevin Quijano; Polat Abdubek; Edward Nigoghossian; Justin Haugen; Heath E Klock; Juli Vincent; Joanna Hale; Jessica Paulsen; Scott A Lesley
Journal:  J Struct Funct Genomics       Date:  2005

5.  α-Galacturonidase(s): a new class of Family 4 glycoside hydrolases with strict specificity and a unique CHEV active site motif.

Authors:  John Thompson; Andreas Pikis; Jamie Rich; Barry G Hall; Stephen G Withers
Journal:  FEBS Lett       Date:  2013-02-14       Impact factor: 4.124

6.  Evolution and biochemistry of family 4 glycosidases: implications for assigning enzyme function in sequence annotations.

Authors:  Barry G Hall; Andreas Pikis; John Thompson
Journal:  Mol Biol Evol       Date:  2009-07-22       Impact factor: 16.240

7.  Characterization of a novel metagenome-derived 6-phospho-β-glucosidase from black liquor sediment.

Authors:  Chunyu Yang; Yu Niu; Chunfang Li; Deyu Zhu; Wei Wang; Xinqiang Liu; Bin Cheng; Cuiqing Ma; Ping Xu
Journal:  Appl Environ Microbiol       Date:  2013-01-18       Impact factor: 4.792

8.  The sim operon facilitates the transport and metabolism of sucrose isomers in Lactobacillus casei ATCC 334.

Authors:  John Thompson; Nicholas Jakubovics; Bindu Abraham; Sonja Hess; Andreas Pikis
Journal:  J Bacteriol       Date:  2008-02-29       Impact factor: 3.490

9.  Structural basis of the strict specificity of a bacterial GH31 α-1,3-glucosidase for nigerooligosaccharides.

Authors:  Marina Ikegaya; Toshio Moriya; Naruhiko Adachi; Masato Kawasaki; Enoch Y Park; Takatsugu Miyazaki
Journal:  J Biol Chem       Date:  2022-03-12       Impact factor: 5.486

  9 in total

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