Literature DB >> 12586397

Genetic variability of the frameshift region in IS911 transposable elements from Escherichia coli clinical isolates.

Patricia Licznar1, Claire Bertrand, Isabelle Canal, Marie Françoise Prère, Olivier Fayet.   

Abstract

The IS911 bacterial transposable element has been analyzed for its mechanism of transposition and for the way it controls the expression of its genes by programmed -1 translational frameshifting. In the present study the prevalence of IS911 has been determined in the Enterobacteriaceae family and in other Gram-negative bacilli. Three variants, found in Escherichia coli clinical isolates and having mutations in the region implicated in frameshifting, were functionally characterized. All three were altered in their frameshifting and transposition abilities, suggesting that the frameshift region of IS911 may constitute a target for mutations reducing the transposition frequency of this mobile element in natural populations of E. coli.

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Year:  2003        PMID: 12586397     DOI: 10.1111/j.1574-6968.2003.tb11522.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  2 in total

1.  -1 frameshifting at a CGA AAG hexanucleotide site is required for transposition of insertion sequence IS1222.

Authors:  Nina Mejlhede; Patricia Licznar; Marie-Françoise Prère; Norma M Wills; Raymond F Gesteland; John F Atkins; Olivier Fayet
Journal:  J Bacteriol       Date:  2004-05       Impact factor: 3.490

2.  Back-translation for discovering distant protein homologies in the presence of frameshift mutations.

Authors:  Marta Girdea; Laurent Noe; Gregory Kucherov
Journal:  Algorithms Mol Biol       Date:  2010-01-04       Impact factor: 1.405

  2 in total

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