Literature DB >> 12578349

Aromatic stacking in the sugar binding site of the lactose permease.

Lan Guan1, Yonglin Hu, H Ronald Kaback.   

Abstract

Major determinants for substrate recognition by the lactose permease of Escherichia coli are at the interface between helices IV (Glu126, Ala122), V (Arg144, Cys148), and VIII (Glu269). We demonstrate here that Trp151, one turn of helix V removed from Cys148, also plays an important role in substrate binding probably by aromatic stacking with the galactopyranosyl ring. Mutants with Phe or Tyr in place of Trp151 catalyze active lactose transport with time courses nearly the same as wild type. In addition, apparent K(m) values for lactose transport in the Phe or Tyr mutants are only 6- or 3-fold higher than wild type, respectively, with a comparable V(max). Surprisingly, however, binding of high-affinity galactoside analogues is severely compromised in the mutants; the affinity of mutant Trp151-->Phe or Trp151-->Tyr is diminished by factors of at least 50 or 20, respectively. The results demonstrate that Trp151 is an important component of the binding site, probably orienting the galactopyranosyl ring so that important H-bond interactions with side chains in helices IV, V, and VIII can be realized. The results are discussed in the context of a current model for the binding site.

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Year:  2003        PMID: 12578349     DOI: 10.1021/bi027152m

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  35 in total

1.  Binding affinity of lactose permease is not altered by the H+ electrochemical gradient.

Authors:  Lan Guan; H Ronald Kaback
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-10       Impact factor: 11.205

2.  Conservation of residues involved in sugar/H(+) symport by the sucrose permease of Escherichia coli relative to lactose permease.

Authors:  Viveka Vadyvaloo; Irina N Smirnova; Vladimir N Kasho; H Ronald Kaback
Journal:  J Mol Biol       Date:  2006-03-09       Impact factor: 5.469

Review 3.  How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteria.

Authors:  Josef Deutscher; Christof Francke; Pieter W Postma
Journal:  Microbiol Mol Biol Rev       Date:  2006-12       Impact factor: 11.056

Review 4.  Lessons from lactose permease.

Authors:  Lan Guan; H Ronald Kaback
Journal:  Annu Rev Biophys Biomol Struct       Date:  2006

5.  Energetics of ligand-induced conformational flexibility in the lactose permease of Escherichia coli.

Authors:  Yiling Nie; Irina Smirnova; Vladimir Kasho; H Ronald Kaback
Journal:  J Biol Chem       Date:  2006-09-26       Impact factor: 5.157

6.  Solution structure of family 21 carbohydrate-binding module from Rhizopus oryzae glucoamylase.

Authors:  Yu-Nan Liu; Yen-Ting Lai; Wei-I Chou; Margaret Dah-Tsyr Chang; Ping-Chiang Lyu
Journal:  Biochem J       Date:  2007-04-01       Impact factor: 3.857

7.  Evolutionary mix-and-match with MFS transporters II.

Authors:  M Gregor Madej; H Ronald Kaback
Journal:  Proc Natl Acad Sci U S A       Date:  2013-11-20       Impact factor: 11.205

8.  Structure of LacY with an α-substituted galactoside: Connecting the binding site to the protonation site.

Authors:  Hemant Kumar; Janet S Finer-Moore; H Ronald Kaback; Robert M Stroud
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-08       Impact factor: 11.205

9.  An early event in the transport mechanism of LacY protein: interaction between helices V and I.

Authors:  Yonggang Zhou; M Gregor Madej; Lan Guan; Yiling Nie; H Ronald Kaback
Journal:  J Biol Chem       Date:  2011-07-05       Impact factor: 5.157

10.  Probing of the rates of alternating access in LacY with Trp fluorescence.

Authors:  Irina Smirnova; Vladimir Kasho; Junichi Sugihara; H Ronald Kaback
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-03       Impact factor: 11.205

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