Literature DB >> 12574065

Proteome analysis by mass spectrometry.

P Lee Ferguson1, Richard D Smith.   

Abstract

The coupling of high-performance mass spectrometry instrumentation with highly efficient chromatographic and electrophoretic separations has enabled rapid qualitative and quantitative analysis of thousands of proteins from minute samples of biological materials. Here, we review recent progress in the development and application of mass spectrometry-based techniques for the qualitative and quantitative analysis of global proteome samples derived from whole cells, tissues, or organisms. Techniques such as multidimensional peptide and protein separations coupled with mass spectrometry, accurate mass measurement of peptides from global proteome digests, and mass spectrometric characterization of intact proteins hold great promise for characterization of highly complex protein mixtures. Advances in chemical tagging and isotope labeling techniques have enabled quantitative analysis of proteomes, and highly specific isolation strategies have been developed aimed at selective analysis of posttranslationally modified proteins.

Mesh:

Substances:

Year:  2003        PMID: 12574065     DOI: 10.1146/annurev.biophys.32.110601.141854

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  32 in total

1.  Proteomic analysis of shear stress-mediated protection from TNF-alpha in endothelial cells.

Authors:  Julie K Freed; Andrew S Greene
Journal:  Microcirculation       Date:  2010-05       Impact factor: 2.628

Review 2.  Finding biomarkers is getting easier.

Authors:  Brian Patrick Bradley
Journal:  Ecotoxicology       Date:  2012-03-13       Impact factor: 2.823

3.  Mass spectrometry reveals specific and global molecular transformations during viral infection.

Authors:  Eden P Go; William R Wikoff; Zhouxin Shen; Grace O'Maille; Hirotoshi Morita; Thomas P Conrads; Anders Nordstrom; Sunia A Trauger; Wilasinee Uritboonthai; David A Lucas; King C Chan; Timothy D Veenstra; Hanna Lewicki; Michael B Oldstone; Anette Schneemann; Gary Siuzdak
Journal:  J Proteome Res       Date:  2006-09       Impact factor: 4.466

Review 4.  Advances in proteomics data analysis and display using an accurate mass and time tag approach.

Authors:  Jennifer S D Zimmer; Matthew E Monroe; Wei-Jun Qian; Richard D Smith
Journal:  Mass Spectrom Rev       Date:  2006 May-Jun       Impact factor: 10.946

5.  Fragmentation of leucine enkephalin as a function of laser fluence in a MALDI TOF-TOF.

Authors:  Jennifer M Campbell; Marvin L Vestal; Paul S Blank; Stephen E Stein; Jonathan A Epstein; Alfred L Yergey
Journal:  J Am Soc Mass Spectrom       Date:  2007-01-03       Impact factor: 3.109

Review 6.  Accurate mass measurements in proteomics.

Authors:  Tao Liu; Mikhail E Belov; Navdeep Jaitly; Wei-Jun Qian; Richard D Smith
Journal:  Chem Rev       Date:  2007-07-25       Impact factor: 60.622

7.  Digestion of native proteins for proteomics using a thermocycler.

Authors:  Obolbek A Turapov; Galina V Mukamolova; Andrew R Bottrill; Michael K Pangburn
Journal:  Anal Chem       Date:  2008-06-26       Impact factor: 6.986

8.  On-plate digestion using a commercial microfraction collector for nano-HPLC matrix-assisted laser desorption/ionization tandem time-of-flight protein analysis.

Authors:  Rui Vitorino; Sofia Guedes; Kenneth Tomer; Pedro Domingues; José Duarte; Francisco Amado
Journal:  Anal Biochem       Date:  2008-05-10       Impact factor: 3.365

9.  The standard protein mix database: a diverse data set to assist in the production of improved Peptide and protein identification software tools.

Authors:  John Klimek; James S Eddes; Laura Hohmann; Jennifer Jackson; Amelia Peterson; Simon Letarte; Philip R Gafken; Jonathan E Katz; Parag Mallick; Hookeun Lee; Alexander Schmidt; Reto Ossola; Jimmy K Eng; Ruedi Aebersold; Daniel B Martin
Journal:  J Proteome Res       Date:  2007-08-21       Impact factor: 4.466

10.  Sources of technical variability in quantitative LC-MS proteomics: human brain tissue sample analysis.

Authors:  Paul D Piehowski; Vladislav A Petyuk; Daniel J Orton; Fang Xie; Ronald J Moore; Manuel Ramirez-Restrepo; Anzhelika Engel; Andrew P Lieberman; Roger L Albin; David G Camp; Richard D Smith; Amanda J Myers
Journal:  J Proteome Res       Date:  2013-04-10       Impact factor: 4.466

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.