Literature DB >> 12569534

Sieving mechanisms in polymeric matrices.

Anna Sartori1, Valessa Barbier, Jean-Louis Viovy.   

Abstract

A critical review of the existing theoretical models and experimental evidences for sieving mechanisms during separation of macromolecules, paying particular attention to capillary electrophoresis applications is presented. Gel models (Ogston and reptation) have been successfully applied to highly entangled polymer solutions, where fast and efficient separations can occur. In order to account for the DNA/polymers collision-interaction mechanisms during separation in dilute solutions - characterized by a poorer resolution -, approximated analytical models have been developed. An insight in the mechanism regulating the intermediate case of moderately entangled polymer solutions, for low fields and concentrations of small multiples of the overlap concentration c*, is given by the constraint release approach. This model proposes an upper limit of size separation, increasing with matrix concentration and molecular mass. Finally, the coupling between the reptative motion of the analytes and the effect of matrix constraint release very likely plays a fundamental role in the separation mechanism and requires therefore further and deeper investigation, both theoretically and experimentally.

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Year:  2003        PMID: 12569534     DOI: 10.1002/elps.200390052

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  5 in total

1.  The hydrodynamics of DNA electrophoretic stretch and relaxation in a polymer solution.

Authors:  Sean Ferree; Harvey W Blanch
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

Review 2.  Beyond gel electrophoresis: microfluidic separations, fluorescence burst analysis, and DNA stretching.

Authors:  Kevin D Dorfman; Scott B King; Daniel W Olson; Joel D P Thomas; Douglas R Tree
Journal:  Chem Rev       Date:  2012-11-12       Impact factor: 60.622

3.  Self-associating block copolymer networks for microchip electrophoresis provide enhanced DNA separation via "inchworm" chain dynamics.

Authors:  Thomas N Chiesl; Karl W Putz; Meena Babu; Patrick Mathias; Kashan A Shaikh; Edgar D Goluch; Chang Liu; Annelise E Barron
Journal:  Anal Chem       Date:  2006-07-01       Impact factor: 6.986

4.  Analysis of RNA folding by native polyacrylamide gel electrophoresis.

Authors:  Sarah A Woodson; Eda Koculi
Journal:  Methods Enzymol       Date:  2009-11-17       Impact factor: 1.600

Review 5.  Effect of the matrix on DNA electrophoretic mobility.

Authors:  Nancy C Stellwagen; Earle Stellwagen
Journal:  J Chromatogr A       Date:  2008-12-06       Impact factor: 4.759

  5 in total

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