Literature DB >> 12564928

C2 domain of protein kinase C alpha: elucidation of the membrane docking surface by site-directed fluorescence and spin labeling.

Susy C Kohout1, Senena Corbalán-García, Juan C Gómez-Fernández, Joseph J Falke.   

Abstract

The C2 domain is a conserved signaling motif that triggers membrane docking in a Ca(2+)-dependent manner, but the membrane docking surfaces of many C2 domains have not yet been identified. Two extreme models can be proposed for the docking of the protein kinase C alpha (PKC alpha) C2 domain to membranes. In the parallel model, the membrane-docking surface includes the Ca(2+) binding loops and an anion binding site on beta-strands 3-4, such that the beta-strands are oriented parallel to the membrane. In the perpendicular model, the docking surface is localized to the Ca(2+) binding loops and the beta-strands are oriented perpendicular to the membrane surface. The present study utilizes site-directed fluorescence and spin-labeling to map out the membrane docking surface of the PKC alpha C2 domain. Single cysteine residues were engineered into 18 locations scattered over all regions of the protein surface, and were used as attachment sites for spectroscopic probes. The environmentally sensitive fluorescein probe identified positions where Ca(2+) activation or membrane docking trigger measurable fluorescence changes. Ca(2+) binding was found to initiate a global conformational change, while membrane docking triggered the largest fluorescein environmental changes at labeling positions on the three Ca(2+) binding loops (CBL), thereby localizing these loops to the membrane docking surface. Complementary EPR power saturation measurements were carried out using a nitroxide spin probe to determine a membrane depth parameter, Phi, for each spin-labeled mutant. Positive membrane depth parameters indicative of membrane insertion were found for three positions, all located on the Ca(2+) binding loops: N189 on CBL 1, and both R249 and R252 on CBL 3. In addition, EPR power saturation revealed that five positions near the anion binding site are partially protected from collisions with an aqueous paramagnetic probe, indicating that the anion binding site lies at or near the surface of the headgroup layer. Together, the fluorescence and EPR results indicate that the Ca(2+) first and third Ca(2+) binding loops insert directly into the lipid headgroup region of the membrane, and that the anion binding site on beta-strands 3-4 lies near the headgroups. The data support a model in which the beta-strands are tilted toward the parallel orientation relative to the membrane surface.

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Year:  2003        PMID: 12564928      PMCID: PMC3666552          DOI: 10.1021/bi026596f

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

1.  Ca(2+) bridges the C2 membrane-binding domain of protein kinase Calpha directly to phosphatidylserine.

Authors:  N Verdaguer; S Corbalan-Garcia; W F Ochoa; I Fita; J C Gómez-Fernández
Journal:  EMBO J       Date:  1999-11-15       Impact factor: 11.598

2.  C2 domains from different Ca2+ signaling pathways display functional and mechanistic diversity.

Authors:  E A Nalefski; M A Wisner; J Z Chen; S R Sprang; M Fukuda; K Mikoshiba; J J Falke
Journal:  Biochemistry       Date:  2001-03-13       Impact factor: 3.162

3.  Electrostatic control of the membrane targeting of C2 domains.

Authors:  Diana Murray; Barry Honig
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

4.  Role of electrostatic and hydrophobic interactions in Ca(2+)-dependent phospholipid binding by the C(2)A-domain from synaptotagmin I.

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Journal:  Diabetes       Date:  2002-02       Impact factor: 9.461

Review 5.  Protein kinase C: structural and spatial regulation by phosphorylation, cofactors, and macromolecular interactions.

Authors:  A C Newton
Journal:  Chem Rev       Date:  2001-08       Impact factor: 60.622

6.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

7.  Membrane orientation and position of the C2 domain from cPLA2 by site-directed spin labeling.

Authors:  April A Frazier; Mark A Wisner; Nathan J Malmberg; Kenneth G Victor; Gail E Fanucci; Eric A Nalefski; Joseph J Falke; David S Cafiso
Journal:  Biochemistry       Date:  2002-05-21       Impact factor: 3.162

8.  Identification of the phosphatidylserine binding site in the C2 domain that is important for PKC alpha activation and in vivo cell localization.

Authors:  P Conesa-Zamora; M J Lopez-Andreo; J C Gómez-Fernández; S Corbalán-García
Journal:  Biochemistry       Date:  2001-11-20       Impact factor: 3.162

9.  C2 domains of protein kinase C isoforms alpha, beta, and gamma: activation parameters and calcium stoichiometries of the membrane-bound state.

Authors:  Susy C Kohout; Senena Corbalán-García; Alejandro Torrecillas; Juan C Goméz-Fernandéz; Joseph J Falke
Journal:  Biochemistry       Date:  2002-09-24       Impact factor: 3.162

10.  Additional binding sites for anionic phospholipids and calcium ions in the crystal structures of complexes of the C2 domain of protein kinase calpha.

Authors:  Wendy F Ochoa; Senena Corbalán-Garcia; Ramon Eritja; José A Rodríguez-Alfaro; Juan C Gómez-Fernández; Ignacio Fita; Nuria Verdaguer
Journal:  J Mol Biol       Date:  2002-07-05       Impact factor: 5.469

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  50 in total

1.  Membrane-docking loops of the cPLA2 C2 domain: detailed structural analysis of the protein-membrane interface via site-directed spin-labeling.

Authors:  Nathan J Malmberg; David R Van Buskirk; Joseph J Falke
Journal:  Biochemistry       Date:  2003-11-18       Impact factor: 3.162

2.  Serine 77 in the PDZ domain of PICK1 is a protein kinase Cα phosphorylation site regulated by lipid membrane binding.

Authors:  Ina Ammendrup-Johnsen; Thor S Thorsen; Ulrik Gether; Kenneth L Madsen
Journal:  Biochemistry       Date:  2012-01-06       Impact factor: 3.162

Review 3.  Use of EPR power saturation to analyze the membrane-docking geometries of peripheral proteins: applications to C2 domains.

Authors:  Nathan J Malmberg; Joseph J Falke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2005

Review 4.  Membrane binding domains.

Authors:  James H Hurley
Journal:  Biochim Biophys Acta       Date:  2006-03-24

5.  Structural bioinformatics prediction of membrane-binding proteins.

Authors:  Nitin Bhardwaj; Robert V Stahelin; Robert E Langlois; Wonhwa Cho; Hui Lu
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6.  Probing the Dynamics and Structural Topology of the Reconstituted Human KCNQ1 Voltage Sensor Domain (Q1-VSD) in Lipid Bilayers Using Electron Paramagnetic Resonance Spectroscopy.

Authors:  Gunjan Dixit; Indra D Sahu; Warren D Reynolds; Tessa M Wadsworth; Benjamin D Harding; Colleen K Jaycox; Carole Dabney-Smith; Charles R Sanders; Gary A Lorigan
Journal:  Biochemistry       Date:  2019-01-30       Impact factor: 3.162

7.  The ATP-dependent membrane localization of protein kinase Calpha is regulated by Ca2+ influx and phosphatidylinositol 4,5-bisphosphate in differentiated PC12 cells.

Authors:  Consuelo Marín-Vicente; Juan C Gómez-Fernández; Senena Corbalán-García
Journal:  Mol Biol Cell       Date:  2005-04-06       Impact factor: 4.138

8.  Configuration of PKCalpha-C2 domain bound to mixed SOPC/SOPS lipid monolayers.

Authors:  Chiu-Hao Chen; Sárka Málková; Sai Venkatesh Pingali; Fei Long; Shekhar Garde; Wonhwa Cho; Mark L Schlossman
Journal:  Biophys J       Date:  2009-11-18       Impact factor: 4.033

9.  Electrostatic and hydrophobic interactions differentially tune membrane binding kinetics of the C2 domain of protein kinase Cα.

Authors:  Angela M Scott; Corina E Antal; Alexandra C Newton
Journal:  J Biol Chem       Date:  2013-04-15       Impact factor: 5.157

10.  A membrane transporter for tryptophan composed of RNA.

Authors:  Teresa Janas; Tadeusz Janas; Michael Yarus
Journal:  RNA       Date:  2004-10       Impact factor: 4.942

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