Literature DB >> 15869384

Use of EPR power saturation to analyze the membrane-docking geometries of peripheral proteins: applications to C2 domains.

Nathan J Malmberg1, Joseph J Falke.   

Abstract

Despite the central importance of peripheral membrane proteins to cellular signaling and metabolic pathways, the structures of protein-membrane interfaces remain largely inaccessible to high-resolution structural methods. In recent years a number of laboratories have contributed to the development of an electron paramagnetic resonance (EPR) power saturation approach that utilizes site-directed spin labeling to determine the key geometric parameters of membrane-docked proteins, including their penetration depths and angular orientations relative to the membrane surface. Representative applications to Ca(2+)-activated, membrane-docking C2 domains are described.

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Year:  2005        PMID: 15869384      PMCID: PMC3637887          DOI: 10.1146/annurev.biophys.34.040204.144534

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  41 in total

1.  Determination of protein secondary structure and solvent accessibility using site-directed fluorescence labeling. Studies of T4 lysozyme using the fluorescent probe monobromobimane.

Authors:  S E Mansoor; H S McHaourab; D L Farrens
Journal:  Biochemistry       Date:  1999-12-07       Impact factor: 3.162

2.  C2 domains from different Ca2+ signaling pathways display functional and mechanistic diversity.

Authors:  E A Nalefski; M A Wisner; J Z Chen; S R Sprang; M Fukuda; K Mikoshiba; J J Falke
Journal:  Biochemistry       Date:  2001-03-13       Impact factor: 3.162

Review 3.  Subcellular targeting by membrane lipids.

Authors:  J H Hurley; T Meyer
Journal:  Curr Opin Cell Biol       Date:  2001-04       Impact factor: 8.382

4.  Crystal structures of spin labeled T4 lysozyme mutants: implications for the interpretation of EPR spectra in terms of structure.

Authors:  R Langen; K J Oh; D Cascio; W L Hubbell
Journal:  Biochemistry       Date:  2000-07-25       Impact factor: 3.162

5.  Electrostatic control of the membrane targeting of C2 domains.

Authors:  Diana Murray; Barry Honig
Journal:  Mol Cell       Date:  2002-01       Impact factor: 17.970

Review 6.  Membrane targeting by C1 and C2 domains.

Authors:  W Cho
Journal:  J Biol Chem       Date:  2001-06-29       Impact factor: 5.157

7.  The sucrose permease of Escherichia coli: functional significance of cysteine residues and properties of a cysteine-less transporter.

Authors:  M Sahin-Tóth; S Frillingos; M C Lawrence; H R Kaback
Journal:  Biochemistry       Date:  2000-05-23       Impact factor: 3.162

8.  Estimation of inter-residue distances in spin labeled proteins at physiological temperatures: experimental strategies and practical limitations.

Authors:  C Altenbach; K J Oh; R J Trabanino; K Hideg; W L Hubbell
Journal:  Biochemistry       Date:  2001-12-25       Impact factor: 3.162

Review 9.  Floundering about at cell membranes: a structural view of phospholipid signaling.

Authors:  J H Hurley; Y Tsujishita; M A Pearson
Journal:  Curr Opin Struct Biol       Date:  2000-12       Impact factor: 6.809

Review 10.  Signaling and subcellular targeting by membrane-binding domains.

Authors:  J H Hurley; S Misra
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000
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  34 in total

1.  Electrostatic interactions and binding orientation of HIV-1 matrix studied by neutron reflectivity.

Authors:  Hirsh Nanda; Siddhartha A K Datta; Frank Heinrich; Mathias Lösche; Alan Rein; Susan Krueger; Joseph E Curtis
Journal:  Biophys J       Date:  2010-10-20       Impact factor: 4.033

Review 2.  Membrane binding domains.

Authors:  James H Hurley
Journal:  Biochim Biophys Acta       Date:  2006-03-24

3.  Modeling a spin-labeled fusion peptide in a membrane: implications for the interpretation of EPR experiments.

Authors:  Maria Sammalkorpi; Themis Lazaridis
Journal:  Biophys J       Date:  2006-10-13       Impact factor: 4.033

4.  Scanned-probe detection of electron spin resonance from a nitroxide spin probe.

Authors:  Eric W Moore; SangGap Lee; Steven A Hickman; Sarah J Wright; Lee E Harrell; Peter P Borbat; Jack H Freed; John A Marohn
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-14       Impact factor: 11.205

5.  Configuration of PKCalpha-C2 domain bound to mixed SOPC/SOPS lipid monolayers.

Authors:  Chiu-Hao Chen; Sárka Málková; Sai Venkatesh Pingali; Fei Long; Shekhar Garde; Wonhwa Cho; Mark L Schlossman
Journal:  Biophys J       Date:  2009-11-18       Impact factor: 4.033

6.  The cellular membrane as a mediator for small molecule interaction with membrane proteins.

Authors:  Christopher G Mayne; Mark J Arcario; Paween Mahinthichaichan; Javier L Baylon; Josh V Vermaas; Latifeh Navidpour; Po-Chao Wen; Sundarapandian Thangapandian; Emad Tajkhorshid
Journal:  Biochim Biophys Acta       Date:  2016-05-06

7.  Electrostatic and hydrophobic interactions differentially tune membrane binding kinetics of the C2 domain of protein kinase Cα.

Authors:  Angela M Scott; Corina E Antal; Alexandra C Newton
Journal:  J Biol Chem       Date:  2013-04-15       Impact factor: 5.157

8.  Deimination of membrane-bound myelin basic protein in multiple sclerosis exposes an immunodominant epitope.

Authors:  Abdiwahab A Musse; Joan M Boggs; George Harauz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-09       Impact factor: 11.205

9.  Membrane Docking of the Synaptotagmin 7 C2A Domain: Electron Paramagnetic Resonance Measurements Show Contributions from Two Membrane Binding Loops.

Authors:  J Ryan Osterberg; Nara Lee Chon; Arthur Boo; Favinn A Maynard; Hai Lin; Jefferson D Knight
Journal:  Biochemistry       Date:  2015-09-10       Impact factor: 3.162

10.  Lateral diffusion of peripheral membrane proteins on supported lipid bilayers is controlled by the additive frictional drags of (1) bound lipids and (2) protein domains penetrating into the bilayer hydrocarbon core.

Authors:  Brian P Ziemba; Joseph J Falke
Journal:  Chem Phys Lipids       Date:  2013-05-20       Impact factor: 3.329

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