Literature DB >> 12554869

Nuclear translation: what is the evidence?

James E Dahlberg1, Elsebet Lund, Elizabeth B Goodwin.   

Abstract

Recently, several reports have been published in support of the idea that protein synthesis occurs in both the nucleus and the cytoplasm. This proposal has generated a great deal of excitement because, if true, it would mean that our thinking about the compartmentalization of cell functions would have to be re-evaluated. The significance and broad implications of this phenomenon require that the experimental evidence used to support it be carefully evaluated. Here, we critique the published evidence in support of, or in opposition to, the question of whether translation occurs in the nucleus. Arguments in support of nuclear translation focus on three issues: (1) the presence of translation factors and ribosomal components in the nucleus, and their recruitment to sites of transcription; (2) amino acid incorporation in isolated nuclei and in nuclei under conditions that should not permit protein import; and (3) the fact that nuclear translation would account for observations that are otherwise difficult to explain. Arguments against nuclear translation emphasize the absence (or low abundance) from nuclei of many translation factors; the likely inactivity of nascent ribosomes; and the loss of translation activity as nuclei are purified from contaminating cytoplasm. In our opinion, all of the experiments on nuclear translation published to date lack critical controls and, therefore, are not compelling; also, traditional mechanisms can explain the observations for which nuclear translation has been invoked. Thus, while we cannot rule out nuclear translation, in the absence of better supporting data we are reluctant to believe it occurs.

Mesh:

Year:  2003        PMID: 12554869      PMCID: PMC1370363          DOI: 10.1261/rna.2121703

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  48 in total

1.  A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes.

Authors:  H X Liu; L Cartegni; M Q Zhang; A R Krainer
Journal:  Nat Genet       Date:  2001-01       Impact factor: 38.330

Review 2.  Nonsense-mediated mRNA decay in health and disease.

Authors:  P A Frischmeyer; H C Dietz
Journal:  Hum Mol Genet       Date:  1999       Impact factor: 6.150

3.  A premature termination codon in either exon of minute virus of mice P4 promoter-generated pre-mRNA can inhibit nuclear splicing of the intervening intron in an open reading frame-dependent manner.

Authors:  A Gersappe; L Burger; D J Pintel
Journal:  J Biol Chem       Date:  1999-08-06       Impact factor: 5.157

Review 4.  Quality control of mRNA function.

Authors:  L E Maquat; G G Carmichael
Journal:  Cell       Date:  2001-01-26       Impact factor: 41.582

5.  The yeast nuclear cap binding complex can interact with translation factor eIF4G and mediate translation initiation.

Authors:  P Fortes; T Inada; T Preiss; M W Hentze; I W Mattaj; A B Sachs
Journal:  Mol Cell       Date:  2000-07       Impact factor: 17.970

6.  SMG-2 is a phosphorylated protein required for mRNA surveillance in Caenorhabditis elegans and related to Upf1p of yeast.

Authors:  M F Page; B Carr; K R Anders; A Grimson; P Anderson
Journal:  Mol Cell Biol       Date:  1999-09       Impact factor: 4.272

7.  Nuclear tRNA aminoacylation and its role in nuclear export of endogenous tRNAs in Saccharomyces cerevisiae.

Authors:  S Sarkar; A K Azad; A K Hopper
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-07       Impact factor: 11.205

Review 8.  Ribosome synthesis in Saccharomyces cerevisiae.

Authors:  J Venema; D Tollervey
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

9.  Interaction of eukaryotic translation initiation factor 4G with the nuclear cap-binding complex provides a link between nuclear and cytoplasmic functions of the m(7) guanosine cap.

Authors:  L McKendrick; E Thompson; J Ferreira; S J Morley; J D Lewis
Journal:  Mol Cell Biol       Date:  2001-06       Impact factor: 4.272

10.  Preparation and characterization of antibodies against human ribosomal proteins: heterogeneous expression of S11 and S30 in a panel of human cancer cell lines.

Authors:  D Nadano; G Ishihara; C Aoki; T Yoshinaka; S Irie; T A Sato
Journal:  Jpn J Cancer Res       Date:  2000-08
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  31 in total

1.  Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD.

Authors:  Chaim Wachtel; Binghui Li; Joseph Sperling; Ruth Sperling
Journal:  RNA       Date:  2004-09-23       Impact factor: 4.942

Review 2.  The nucleus introduced.

Authors:  Thoru Pederson
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-05-01       Impact factor: 10.005

3.  Alternative splicing induced by nonsense mutations in the immunoglobulin mu VDJ exon is independent of truncation of the open reading frame.

Authors:  Marc Bühler; Oliver Mühlemann
Journal:  RNA       Date:  2004-12-21       Impact factor: 4.942

4.  Nonsense-associated alternative splicing of T-cell receptor beta genes: no evidence for frame dependence.

Authors:  Fabio Mohn; Marc Bühler; Oliver Mühlemann
Journal:  RNA       Date:  2004-12-21       Impact factor: 4.942

5.  Under the Tucson sun: a meeting in the desert on mRNA decay.

Authors:  Kristian E Baker; Ciarán Condon
Journal:  RNA       Date:  2004-11       Impact factor: 4.942

6.  Nonsense codons trigger an RNA partitioning shift.

Authors:  Angela D Bhalla; Jayanthi P Gudikote; Jun Wang; Wai-Kin Chan; Yao-Fu Chang; O Renee Olivas; Miles F Wilkinson
Journal:  J Biol Chem       Date:  2008-12-17       Impact factor: 5.157

7.  RNA polymerase II inhibitors dissociate antigenic peptide generation from normal viral protein synthesis: a role for nuclear translation in defective ribosomal product synthesis?

Authors:  Brian P Dolan; Jonathan J Knowlton; Alexandre David; Jack R Bennink; Jonathan W Yewdell
Journal:  J Immunol       Date:  2010-11-03       Impact factor: 5.422

8.  Dynamics of intracellular stress-induced tRNA trafficking.

Authors:  Rabin Dhakal; Chunyi Tong; Sean Anderson; Anna S Kashina; Barry Cooperman; Haim H Bau
Journal:  Nucleic Acids Res       Date:  2019-02-28       Impact factor: 16.971

9.  Interaction of yeast eIF4G with spliceosome components: implications in pre-mRNA processing events.

Authors:  Panagiota Kafasla; J David Barrass; Elizabeth Thompson; Micheline Fromont-Racine; Alain Jacquier; Jean D Beggs; Joe Lewis
Journal:  RNA Biol       Date:  2009-11-18       Impact factor: 4.652

10.  Frame-disrupting mutations elicit pre-mRNA accumulation independently of frame disruption.

Authors:  J Saadi Imam; Jayanthi P Gudikote; Wai-Kin Chan; Miles F Wilkinson
Journal:  Nucleic Acids Res       Date:  2009-12-09       Impact factor: 16.971

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