Literature DB >> 12544471

Analytic validity of cystic fibrosis testing: a preliminary estimate.

Glenn E Palomaki1, Linda A Bradley, C Sue Richards, James E Haddow.   

Abstract

PURPOSE: Derive estimates of analytic sensitivity and specificity of DNA testing for cystic fibrosis in the United States.
METHODS: Analyze published results of the American College of Medical Genetics (ACMG)/College of American Pathologists (CAP) Molecular Genetics Survey between 1996 and 2001, taking into account difficult, simulated clinical samples included for educational purposes.
RESULTS: Analytic sensitivity is 97.9% [95% confidence interval (CI) 96.8-98.7%], and analytic specificity is 99.4% (95% CI 98.7-99.9%) after removing challenges involving delI507 and performing other adjustments. Analytic sensitivity is consistent over the 6 years. Specificity was lower in 1997.
CONCLUSION: These preliminary estimates indicate that analytic validity of cystic fibrosis testing is very good and can likely be improved. To date, fewer than half of the mutations in the panel recommended for preconceptional or prenatal screening have been challenged. The present study highlights the value of performing confirmatory testing when a mutation is identified to reduce false-positive results.

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Year:  2003        PMID: 12544471     DOI: 10.1097/00125817-200301000-00003

Source DB:  PubMed          Journal:  Genet Med        ISSN: 1098-3600            Impact factor:   8.822


  7 in total

1.  A novel method for creating artificial mutant samples for performance evaluation and quality control in clinical molecular genetics.

Authors:  Michael Jarvis; Ramaswamy K Iyer; Laurina O Williams; Walter W Noll; Kirk Thomas; Milhan Telatar; Wayne W Grody
Journal:  J Mol Diagn       Date:  2005-05       Impact factor: 5.568

2.  The Evaluation of Genomic Applications in Practice and Prevention (EGAPP) Initiative: methods of the EGAPP Working Group.

Authors:  Steven M Teutsch; Linda A Bradley; Glenn E Palomaki; James E Haddow; Margaret Piper; Ned Calonge; W David Dotson; Michael P Douglas; Alfred O Berg
Journal:  Genet Med       Date:  2009-01       Impact factor: 8.822

3.  Molecular genetic testing for cystic fibrosis: laboratory performance on the College of American Pathologists external proficiency surveys.

Authors:  Elaine Lyon; Iris Schrijver; Karen E Weck; Andrea Ferreira-Gonzalez; C Sue Richards; Glenn E Palomaki
Journal:  Genet Med       Date:  2014-07-31       Impact factor: 8.822

4.  Chapter 11: challenges in and principles for conducting systematic reviews of genetic tests used as predictive indicators.

Authors:  Daniel E Jonas; Timothy J Wilt; Brent C Taylor; Tania M Wilkins; David B Matchar
Journal:  J Gen Intern Med       Date:  2012-06       Impact factor: 5.128

5.  Quality standards and samples in genetic testing.

Authors:  David Ravine; Graeme Suthers
Journal:  J Clin Pathol       Date:  2012-01-18       Impact factor: 3.411

Review 6.  Can UGT1A1 genotyping reduce morbidity and mortality in patients with metastatic colorectal cancer treated with irinotecan? An evidence-based review.

Authors:  Glenn E Palomaki; Linda A Bradley; Michael P Douglas; Katherine Kolor; W David Dotson
Journal:  Genet Med       Date:  2009-01       Impact factor: 8.822

7.  Cost-effectiveness of the CFTR gene-sequencing test for asymptomatic carriers in the Colombian population

Authors:  Ernesto Andrade; Jorge Díaz
Journal:  Biomedica       Date:  2020-06-15       Impact factor: 0.935

  7 in total

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