Literature DB >> 12543706

Volumetric properties of proteins.

Tigran V Chalikian1.   

Abstract

Structural and thermodynamic characterizations of a variety of intra- and intermolecular interactions stabilizing/destabilizing protein systems represent a major part of multidisciplinary efforts aimed at solving the problems of protein folding and binding. To this end, volumetric techniques have been successfully used to gain insights into protein hydration and intraglobular packing. Despite the fact that the use of volumetric measurements in protein-related studies dates back to the 1950s, such measurements still represent a relatively untapped yet potentially informative means for tackling the problems of protein folding and binding. This notion has been further emphasized by recent advances in the development of highly sensitive volumetric instrumentation that has led to intensifying volumetric investigations of protein systems. This paper reviews the volumetric properties of proteins and their low-molecular-weight analogs, in particular, discussing the recent progress in the use of volumetric data for studying conformational transitions of proteins as well as protein-ligand, protein-protein, and protein-nucleic acid interactions.

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Year:  2003        PMID: 12543706     DOI: 10.1146/annurev.biophys.32.110601.141709

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  31 in total

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Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

2.  Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments.

Authors:  Seishi Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

3.  Local compressibilities of proteins: comparison of optical experiments and simulations for horse heart cytochrome-c.

Authors:  Christina Scharnagl; Maria Reif; Josef Friedrich
Journal:  Biophys J       Date:  2005-04-15       Impact factor: 4.033

4.  Hydration changes in the association of Hoechst 33258 with DNA.

Authors:  John R Kiser; Richard W Monk; Rondey L Smalls; Jeffrey T Petty
Journal:  Biochemistry       Date:  2005-12-27       Impact factor: 3.162

5.  Unfolding and refolding of bovine serum albumin at acid pH: ultrasound and structural studies.

Authors:  N El Kadi; N Taulier; J Y Le Huérou; M Gindre; W Urbach; I Nwigwe; P C Kahn; M Waks
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

6.  Decomposition of protein experimental compressibility into intrinsic and hydration shell contributions.

Authors:  Voichita M Dadarlat; Carol Beth Post
Journal:  Biophys J       Date:  2006-09-22       Impact factor: 4.033

7.  An analysis of the molecular origin of osmolyte-dependent protein stability.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

8.  The effect of glycosylation on interparticle interactions and dimensions of native and denatured phytase.

Authors:  R Høiberg-Nielsen; P Westh; L Arleth
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

9.  Dynamics at the protein-water interface from 17O spin relaxation in deeply supercooled solutions.

Authors:  Carlos Mattea; Johan Qvist; Bertil Halle
Journal:  Biophys J       Date:  2008-06-27       Impact factor: 4.033

10.  High-pressure refolding of bikunin: efficacy and thermodynamics.

Authors:  Matthew B Seefeldt; Jun Ouyang; Wayne A Froland; John F Carpenter; Theodore W Randolph
Journal:  Protein Sci       Date:  2004-10       Impact factor: 6.725

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