Literature DB >> 12538884

High-pressure 1H NMR study of pressure-induced structural changes in the heme environments of metcyanomyoglobins.

Ryo Kitahara1, Minoru Kato, Yoshihiro Taniguchi.   

Abstract

The effect of pressure on the heme environment structure of sperm whale and horse heart metcyanomyoglobins was investigated up to 300 MPa by high-pressure (1)H NMR spectroscopy. Pressure-induced changes in the distances between the observed protons and the heme iron atom were estimated from changes in the dipolar shift due to the paramagnetic effect on the protons. The changes showed that the heme peripheral structure as a whole was compressed by pressure; the movements of the protons in the heme peripheral residues were in the range of +0.16 to -0.54 A/300 MPa. One-dimensional compressibilities for the protons, excluding the protons of the distal His residue, were in the range of 1.0 x 10(-4) to 6.1 x 10(-4)/MPa. The movements of the protons induced by pressure correlated well with the distance between the protons and cavities in the protein. The distal His residue (His 64) moved toward the outside of the heme pocket, but remained in the pocket even at 300 MPa. This movement was driven dominantly by a change in the dihedral angle around the C(alpha)-C(beta) rotational bond of the residue. Comparative work on horse heart metcyanomyoglobin implied that the conformational change of the His 64 imidazole ring was larger in the horse heart metcyanomyoglobin than in the sperm whale metcyanomyoglobin.

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Year:  2003        PMID: 12538884      PMCID: PMC2312426          DOI: 10.1110/ps.4620103

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  43 in total

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Authors:  M Kato; T Fujisawa
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Authors:  K Inoue; H Yamada; K Akasaka; C Herrmann; W Kremer; T Maurer; R Döker; H R Kalbitzer
Journal:  Nat Struct Biol       Date:  2000-07

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Authors:  K Akasaka; H Li; H Yamada; R Li; T Thoresen; C K Woodward
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

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Authors:  K Gekko; Y Hasegawa
Journal:  Biochemistry       Date:  1986-10-21       Impact factor: 3.162

8.  Structure of myoglobin refined at 2-0 A resolution. I. Crystallographic refinement of metmyoglobin from sperm whale.

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Journal:  J Mol Biol       Date:  1977-03-05       Impact factor: 5.469

9.  Two folded conformers of ubiquitin revealed by high-pressure NMR.

Authors:  R Kitahara; H Yamada; K Akasaka
Journal:  Biochemistry       Date:  2001-11-13       Impact factor: 3.162

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Authors:  S D Emerson; G La Mar
Journal:  Biochemistry       Date:  1990-02-13       Impact factor: 3.162

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  2 in total

1.  A comparative study on axial coordination and ligand binding in ferric mini myoglobin and horse heart myoglobin.

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Journal:  Biophys J       Date:  2007-05-11       Impact factor: 4.033

2.  Activation parameters for the spontaneous and pressure-induced phases of the dissociation of single-ring GroEL (SR1) chaperonin.

Authors:  Markandeswar Panda; Paul M Horowitz
Journal:  Protein J       Date:  2004-01       Impact factor: 4.000

  2 in total

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