Literature DB >> 12520006

GPCRDB information system for G protein-coupled receptors.

Florence Horn1, Emmanuel Bettler, Laerte Oliveira, Fabien Campagne, Fred E Cohen, Gerrit Vriend.   

Abstract

The GPCRDB is a molecular class-specific information system that collects, combines, validates and disseminates heterogeneous data on G protein-coupled receptors (GPCRs). The database stores data on sequences, ligand binding constants and mutations. The system also provides computationally derived data such as sequence alignments, homology models, and a series of query and visualization tools. The GPCRDB is updated automatically once every 4-5 months and is freely accessible at http://www.gpcr.org/7tm/.

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Year:  2003        PMID: 12520006      PMCID: PMC165550          DOI: 10.1093/nar/gkg103

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  12 in total

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2.  Collecting and harvesting biological data: the GPCRDB and NucleaRDB information systems.

Authors:  F Horn; G Vriend; F E Cohen
Journal:  Nucleic Acids Res       Date:  2001-01-01       Impact factor: 16.971

Review 3.  TinyGRAP database: a bioinformatics tool to mine G-protein-coupled receptor mutant data.

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Journal:  Trends Pharmacol Sci       Date:  1999-12       Impact factor: 14.819

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Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

5.  Interactive construction of residue-based diagrams of proteins: the RbDe web service.

Authors:  K Konvicka; F Campagne; H Weinstein
Journal:  Protein Eng       Date:  2000-06

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Journal:  Nucleic Acids Res       Date:  2002-01-01       Impact factor: 16.971

7.  G-protein-coupled receptor websites.

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Journal:  Trends Pharmacol Sci       Date:  2002-11       Impact factor: 14.819

8.  WHAT IF: a molecular modeling and drug design program.

Authors:  G Vriend
Journal:  J Mol Graph       Date:  1990-03

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Authors:  A Bairoch; R Apweiler
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

10.  The interaction of class B G protein-coupled receptors with their hormones.

Authors:  F Horn; R Bywater; G Krause; W Kuipers; L Oliveira; A C Paiva; C Sander; G Vriend
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  110 in total

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3.  PRED-GPCR: GPCR recognition and family classification server.

Authors:  P K Papasaikas; P G Bagos; Z I Litou; V J Promponas; S J Hamodrakas
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

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Journal:  Bioinformatics       Date:  2010-05-25       Impact factor: 6.937

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Review 7.  Homology modeling of opioid receptor-ligand complexes using experimental constraints.

Authors:  Irina D Pogozheva; Magdalena J Przydzial; Henry I Mosberg
Journal:  AAPS J       Date:  2005-10-05       Impact factor: 4.009

8.  Development and application of hybrid structure based method for efficient screening of ligands binding to G-protein coupled receptors.

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Journal:  J Comput Aided Mol Des       Date:  2006-10-13       Impact factor: 3.686

Review 9.  Corticotropin releasing hormone and the skin.

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10.  Molecular cloning and expression analysis of mc5r like genes (mc5rl) in Ruditapes philippinarum (Manila clam) after aerial exposure and low-temperature stress.

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Journal:  Mol Biol Rep       Date:  2020-10-31       Impact factor: 2.316

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