Literature DB >> 12513989

Novel approach to the improvement of biphenyl and polychlorinated biphenyl degradation activity: promoter implantation by homologous recombination.

Yoshiyuki Ohtsubo1, Minoru Shimura, Mina Delawary, Kazuhide Kimbara, Masamichi Takagi, Toshiaki Kudo, Akinori Ohta, Yuji Nagata.   

Abstract

To improve the capabilities of microorganisms relevant for biodegradation, we developed a new genetic approach and applied it to the bph operon (bphEGF[orf4]A1A2A3CD[orf1]A4R) of Pseudomonas sp. strain KKS102 to enhance its biphenyl- and polychlorinated biphenyl (PCB)-degrading activity. A native promoter of the bph operon, which was under control, was replaced through homologous recombination by a series of promoters that had constitutive activity. By testing a series of promoters with various strengths, we were able to obtain strains that have enhanced degradation activity for biphenyl and PCBs. This strategy removes the rate-limiting factor associated with transcription and has the potential to improve the degradation activity of a wide variety of microorganisms involved in biodegradation.

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Year:  2003        PMID: 12513989      PMCID: PMC152473          DOI: 10.1128/AEM.69.1.146-153.2003

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  30 in total

Review 1.  Development of hybrid strains for the mineralization of chloroaromatics by patchwork assembly.

Authors:  W Reineke
Journal:  Annu Rev Microbiol       Date:  1998       Impact factor: 15.500

2.  Identification of an UP element consensus sequence for bacterial promoters.

Authors:  S T Estrem; T Gaal; W Ross; R L Gourse
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

3.  Adaptation to nutrient starvation in Rhizobium leguminosarum bv. phaseoli: analysis of survival, stress resistance, and changes in macromolecular synthesis during entry to and exit from stationary phase.

Authors:  S H Thorne; H D Williams
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

4.  Designing recombinant Pseudomonas strains to enhance biodesulfurization.

Authors:  M E Gallardo; A Ferrández; V De Lorenzo; J L García; E Díaz
Journal:  J Bacteriol       Date:  1997-11       Impact factor: 3.490

5.  Effector specificity mutants of the transcriptional activator NahR of naphthalene degrading Pseudomonas define protein sites involved in binding of aromatic inducers.

Authors:  A Cebolla; C Sousa; V de Lorenzo
Journal:  J Biol Chem       Date:  1997-02-14       Impact factor: 5.157

6.  Purification and preliminary characterization of a serine hydrolase involved in the microbial degradation of polychlorinated biphenyls.

Authors:  S Y Seah; G Terracina; J T Bolin; P Riebel; V Snieckus; L D Eltis
Journal:  J Biol Chem       Date:  1998-09-04       Impact factor: 5.157

7.  Cometabolic oxidation of polychlorinated biphenyls in soil with a surfactant-based field application vector.

Authors:  C A Lajoie; A C Layton; G S Sayler
Journal:  Appl Environ Microbiol       Date:  1994-08       Impact factor: 4.792

8.  Escherichia coli promoters with UP elements of different strengths: modular structure of bacterial promoters.

Authors:  W Ross; S E Aiyar; J Salomon; R L Gourse
Journal:  J Bacteriol       Date:  1998-10       Impact factor: 3.490

Review 9.  Mechanisms of membrane toxicity of hydrocarbons.

Authors:  J Sikkema; J A de Bont; B Poolman
Journal:  Microbiol Rev       Date:  1995-06

10.  An aromatic effector specificity mutant of the transcriptional regulator DmpR overcomes the growth constraints of Pseudomonas sp. strain CF600 on para-substituted methylphenols.

Authors:  H Pavel; M Forsman; V Shingler
Journal:  J Bacteriol       Date:  1994-12       Impact factor: 3.490

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  5 in total

1.  Polychlorinated biphenyl rhizoremediation by Pseudomonas fluorescens F113 derivatives, using a Sinorhizobium meliloti nod system to drive bph gene expression.

Authors:  Marta Villacieros; Clare Whelan; Martina Mackova; Jesper Molgaard; María Sánchez-Contreras; Javier Lloret; Daniel Aguirre de Cárcer; Roke I Oruezábal; Luis Bolaños; Thomas Macek; Ulrich Karlson; David N Dowling; Marta Martín; Rafael Rivilla
Journal:  Appl Environ Microbiol       Date:  2005-05       Impact factor: 4.792

2.  Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader.

Authors:  Yoshiyuki Ohtsubo; Fumito Maruyama; Hisayuki Mitsui; Yuji Nagata; Masataka Tsuda
Journal:  J Bacteriol       Date:  2012-12       Impact factor: 3.490

3.  Bacterial metabolism of polycyclic aromatic hydrocarbons: strategies for bioremediation.

Authors:  Archana Chauhan; John G Oakeshott; Rakesh K Jain
Journal:  Indian J Microbiol       Date:  2008-05-01       Impact factor: 2.461

4.  Dechlorination of polychlorobiphenyl degradation metabolites by a recombinant glutathione S-transferase from Acidovorax sp. KKS102.

Authors:  Dayyabu Shehu; Zazali Alias
Journal:  FEBS Open Bio       Date:  2019-01-30       Impact factor: 2.693

5.  Biodegradation of aromatic pollutants meets synthetic biology.

Authors:  Liang Xiang; Guoqiang Li; Luan Wen; Cong Su; Yong Liu; Hongzhi Tang; Junbiao Dai
Journal:  Synth Syst Biotechnol       Date:  2021-07-01
  5 in total

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