Literature DB >> 12509283

Arabidopsis thaliana, a versatile model system for study of eukaryotic genome-maintenance functions.

John B Hays1.   

Abstract

The genome of the model plant Arabidopsis thaliana encodes many orthologs of human genome-maintenance proteins, and in several important cases plant DNA repair and mutation-antagonism functions resemble their mammalian counterparts more closely than do those of established microbial models. These orthologs, in conjunction with the powerful tools now available for work with Arabidopsis and the practical advantages of its small size and rapid life cycle, now make it an attractive model system for study of eukaryotic DNA repair and mutagenesis. Already, null mutations that inactivate proteins involved in repair of DNA double-strand breaks or in DNA translesion synthesis and are lethal in mice have proved to be tolerated by plants. This review compares in some detail the genome-maintenance activities encoded by plants, mammals and microbes, and describes important Arabidopsis tools and life cycle characteristics. It concludes with selected examples that illustrate Arabidopsis advantages and/or reveal new insights into genome-maintenance functions of general interest.

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Mesh:

Year:  2002        PMID: 12509283     DOI: 10.1016/s1568-7864(02)00093-9

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  36 in total

1.  Phosphorylation of H2AX histones in response to double-strand breaks and induction of premature chromatin condensation in hydroxyurea-treated root meristem cells of Raphanus sativus, Vicia faba, and Allium porrum.

Authors:  Dorota Rybaczek; Janusz Maszewski
Journal:  Protoplasma       Date:  2006-11-21       Impact factor: 3.356

2.  Rapid accumulation of mutations during seed-to-seed propagation of mismatch-repair-defective Arabidopsis.

Authors:  Peter D Hoffman; Jeffrey M Leonard; Gerrick E Lindberg; Stephanie R Bollmann; John B Hays
Journal:  Genes Dev       Date:  2004-11-01       Impact factor: 11.361

3.  ddm1 plants are sensitive to methyl methane sulfonate and NaCl stresses and are deficient in DNA repair.

Authors:  Youli Yao; Andriy Bilichak; Andrey Golubov; Igor Kovalchuk
Journal:  Plant Cell Rep       Date:  2012-04-27       Impact factor: 4.570

4.  Evidence for base excision repair of oxidative DNA damage in chloroplasts of Arabidopsis thaliana.

Authors:  Benjamin L Gutman; Krishna K Niyogi
Journal:  J Biol Chem       Date:  2009-04-16       Impact factor: 5.157

5.  Understanding DNA repair and recombination in higher plant genome: information from genome-wide screens in Arabidopsis and rice.

Authors:  Sanjay Kumar Singh; Swarup Roy Choudhury; Sujit Roy; Dibyendu N Sengupta
Journal:  Plant Signal Behav       Date:  2011-01-01

6.  Transcriptomic, proteomic and metabolomic analysis of maize responses to UV-B: comparison of greenhouse and field growth conditions.

Authors:  Paula Casati; Mabel Campi; Darren J Morrow; John Fernandes; Virginia Walbot
Journal:  Plant Signal Behav       Date:  2011-08-01

Review 7.  Chlamydomonas reinhardtii: a convenient model system for the study of DNA repair in photoautotrophic eukaryotes.

Authors:  Daniel Vlcek; Andrea Sevcovicová; Barbara Sviezená; Eliska Gálová; Eva Miadoková
Journal:  Curr Genet       Date:  2007-11-09       Impact factor: 3.886

8.  Reduction of stability of arabidopsis genomic and transgenic DNA-repeat sequences (microsatellites) by inactivation of AtMSH2 mismatch-repair function.

Authors:  Jeffrey M Leonard; Stephanie R Bollmann; John B Hays
Journal:  Plant Physiol       Date:  2003-09       Impact factor: 8.340

9.  Genome stability in the uvh6 mutant of Arabidopsis thaliana.

Authors:  Andriy Bilichak; Youli Yao; Viktor Titov; Andrey Golubov; Igor Kovalchuk
Journal:  Plant Cell Rep       Date:  2014-02-20       Impact factor: 4.570

10.  ATR regulates a G2-phase cell-cycle checkpoint in Arabidopsis thaliana.

Authors:  Kevin Culligan; Alain Tissier; Anne Britt
Journal:  Plant Cell       Date:  2004-04-09       Impact factor: 11.277

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