Literature DB >> 12507451

An algorithm for rapid calculation of a probabilistic functional atlas of subcortical structures from electrophysiological data collected during functional neurosurgery procedures.

Wieslaw L Nowinski1, Dmitry Belov, Alim Louis Benabid.   

Abstract

The paper introduces an optimal algorithm for rapid calculation of a probabilistic functional atlas (PFA) of subcortical structures from data collected during functional neurosurgery procedures. The PFA is calculated based on combined intraoperative electrophysiology, pre- and intraoperative neuroimaging, and postoperative neurological verification. The algorithm converts the coordinates of the neurologically most effective contacts into probabilistic functional maps taking into account the geometry of a stimulating electrode. The PFA calculation comprises the reconstruction of the contact coordinates from two orthogonal projections, normalizing (warping) the contacts modeled as cylinders, voxelizing the contact models, calculating the atlas, and computing probability. In addition, an analytical representation of the PFA is formulated based on Gaussian modeling. The initial PFA has been calculated from the data collected during the treatment of 274 Parkinson's disease patients, most of them operated bilaterally (487 operated hemispheres). It contains the most popular stereotactic targets, the subthalamic nucleus, globus pallidus internus, and ventral intermedius nucleus. The key application of the algorithm is targeting in stereotactic and functional neurosurgery, and it also can be employed in human and animal brain research.

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Year:  2003        PMID: 12507451     DOI: 10.1006/nimg.2002.1299

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  14 in total

1.  CranialVault and its CRAVE tools: a clinical computer assistance system for deep brain stimulation (DBS) therapy.

Authors:  Pierre-François D'Haese; Srivatsan Pallavaram; Rui Li; Michael S Remple; Chris Kao; Joseph S Neimat; Peter E Konrad; Benoit M Dawant
Journal:  Med Image Anal       Date:  2010-08-01       Impact factor: 8.545

2.  Comparison of piece-wise linear, linear, and nonlinear atlas-to-patient warping techniques: analysis of the labeling of subcortical nuclei for functional neurosurgical applications.

Authors:  M Mallar Chakravarty; Abbas F Sadikot; Jürgen Germann; Pierre Hellier; Gilles Bertrand; D Louis Collins
Journal:  Hum Brain Mapp       Date:  2009-11       Impact factor: 5.038

3.  Construction of relational topographies from the quantitative measurements of functional deep brain stimulation using a 'roving window' interpolation algorithm.

Authors:  Mahesh B Shenai; Harrison Walker; Stephanie Guthrie; Ray Watts; Barton L Guthrie
Journal:  Stereotact Funct Neurosurg       Date:  2009-11-20       Impact factor: 1.875

4.  Computational and mathematical methods in brain atlasing.

Authors:  Wieslaw L Nowinski
Journal:  Neuroradiol J       Date:  2017-11-03

5.  A probabilistic functional atlas of the human subthalamic nucleus.

Authors:  Wieslaw L Nowinski; Dmitry Belov; Pierre Pollak; Alim Louis Benabid
Journal:  Neuroinformatics       Date:  2004

Review 6.  Human brain atlasing: past, present and future.

Authors:  Wieslaw L Nowinski
Journal:  Neuroradiol J       Date:  2017-11-03

7.  Effect of data normalization on the creation of neuro-probabilistic atlases.

Authors:  Pierre-François D'Haese; Srivatsan Pallavaram; Chris Kao; Joseph S Neimat; Peter E Konrad; Benoit M Dawant
Journal:  Stereotact Funct Neurosurg       Date:  2013-02-27       Impact factor: 1.875

8.  Robust S1, S2, and thalamic activations in individual subjects with vibrotactile stimulation at 1.5 and 3.0 T.

Authors:  M Mallar Chakravarty; Pedro Rosa-Neto; Scott Broadbent; Alan C Evans; D Louis Collins
Journal:  Hum Brain Mapp       Date:  2009-04       Impact factor: 5.038

9.  Effect of brain shift on the creation of functional atlases for deep brain stimulation surgery.

Authors:  Srivatsan Pallavaram; Benoit M Dawant; Michael S Remple; Joseph S Neimat; Chris Kao; Peter E Konrad; Pierre-François D'Haese
Journal:  Int J Comput Assist Radiol Surg       Date:  2009-08-02       Impact factor: 2.924

10.  StimVision Software: Examples and Applications in Subcallosal Cingulate Deep Brain Stimulation for Depression.

Authors:  Angela M Noecker; Ki Sueng Choi; Patricio Riva-Posse; Robert E Gross; Helen S Mayberg; Cameron C McIntyre
Journal:  Neuromodulation       Date:  2017-06-27
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