Literature DB >> 1250693

Chemical evidence that chromatin DNA exists as 160 base pair beads interspersed with 40 base pair bridges.

R T Simpson, J P Whitlock.   

Abstract

Digestion of rat liver nuclei by an endogenous endonuclease generates double-stranded DNA fragments which are initially about 205 base pairs long, as reported previously by Hewish and Burgoyne. As digestion proceeds, the average size of these fragments is reduced to about 160 base pairs. Electrophoresis under denaturing conditions shows that these DNA fragments contain single strand nicks at ten base intervals. Fifteen bands, 10-150 bases, are clearly resolvable. DNA Fragments of 160 to 200 nucleotides are not resolved as distinct species. The results suggest that the chromosomal subunit contains both a 160 base-pair DNA segment, in a conformation susceptible to single strand nicking at ten base intervals, and a forty base-pair DNA segment in a conformation more uniformly susceptible to endogenous endonuclease activity. This chemical evidence agrees with morphological observations suggesting that chromatin has a "bead and bridge" structure.

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Year:  1976        PMID: 1250693      PMCID: PMC342882          DOI: 10.1093/nar/3.1.117

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Electron microscopic and biochemical evidence that chromatin structure is a repeating unit.

Authors:  P Oudet; M Gross-Bellard; P Chambon
Journal:  Cell       Date:  1975-04       Impact factor: 41.582

2.  Cleavage of DNA in nuclei and chromatin with staphylococcal nuclease.

Authors:  R Axel
Journal:  Biochemistry       Date:  1975-07       Impact factor: 3.162

3.  A comparison of the digestion of nuclei and chromatin by staphylococcal nuclease.

Authors:  B Sollner-Webb; G Felsenfeld
Journal:  Biochemistry       Date:  1975-07       Impact factor: 3.162

4.  ISOLATION OF NUCLEI FROM MAMMALIAN TISSUES THROUGH THE USE OF TRITON X-100.

Authors:  W C HYMER; E L KUFF
Journal:  J Histochem Cytochem       Date:  1964-05       Impact factor: 2.479

5.  Preparation of native chromatin and damage caused by shearing.

Authors:  M Noll; J O Thomas; R D Kornberg
Journal:  Science       Date:  1975-03-28       Impact factor: 47.728

6.  Hemophilus aegyptius restriction edonuclease cleavage map of the simian virus 40 genome and its colinear relation with the hemophilus influenzae cleavage map of SV40.

Authors:  P Lebowitz; W Siegel; J Sklar
Journal:  J Mol Biol       Date:  1974-09-05       Impact factor: 5.469

7.  Spheroid chromatin units (v bodies).

Authors:  A L Olins; D E Olins
Journal:  Science       Date:  1974-01-25       Impact factor: 47.728

8.  Electron microscopy of chromatin subunit particles.

Authors:  E F van Bruggen; A C Arnberg; K E van Holde; C G Sahasrabuddhe; B R Shaw
Journal:  Biochem Biophys Res Commun       Date:  1974-10-23       Impact factor: 3.575

Review 9.  A model for chromatin structure.

Authors:  H J Li
Journal:  Nucleic Acids Res       Date:  1975-08       Impact factor: 16.971

10.  Resolution of multiple ribonucleic acid species by polyacrylamide gel electrophoresis.

Authors:  A C Peacock; C W Dingman
Journal:  Biochemistry       Date:  1967-06       Impact factor: 3.162

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  28 in total

1.  Chromatin nu bodies: isolation, subfractionation and physical characterization.

Authors:  A L Olins; R D Carlson; E B Wright; D E Olins
Journal:  Nucleic Acids Res       Date:  1976-12       Impact factor: 16.971

2.  Nonuniform distribution of DNA repair in chromatin after treatment with methyl methanesulfonate.

Authors:  W J Bodell
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

3.  Periodicity and fragment size of DNA from mouse TLT hepatoma chromatin and chromatin fractions using endogenous and exogenous nucleases.

Authors:  J D Duerksen; K W Connor
Journal:  Mol Cell Biochem       Date:  1978-04-11       Impact factor: 3.396

4.  Preparation and physical characterization of a homogeneous population of monomeric nucleosomes from HeLa cells.

Authors:  J P Whitlock; R T Simpson
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

5.  Nuclease digestion in between and within nucleosomes.

Authors:  W Greil; T Igo-Kemenes; H G Zachau
Journal:  Nucleic Acids Res       Date:  1976-10       Impact factor: 16.971

6.  Digestion of insect chromatin with micrococcal nuclease, DNase I and DNase I combined with single-strand specific nuclease S1.

Authors:  E R Schmidt
Journal:  Nucleic Acids Res       Date:  1977-07       Impact factor: 16.971

7.  The effect of H1 histone on the action of DNA-relaxing enzyme.

Authors:  M Bina-Stein; M F Singer
Journal:  Nucleic Acids Res       Date:  1977-01       Impact factor: 16.971

8.  Structural repeat units of Chinese hamster ovary chromatin. Evidence for variations in repeat unit DNA size in higher eukaryotes.

Authors:  R L Rill; D A Nelson; D K Oosterhof; J C Hozier
Journal:  Nucleic Acids Res       Date:  1977-04       Impact factor: 16.971

9.  Ligation and synthesis of chromatin deoxyribonucleic acid in vitro in neuronal, glial and liver nuclei isolated from adult guinea pig.

Authors:  N Inoue; T Ono; T Kato
Journal:  Biochem J       Date:  1979-06-15       Impact factor: 3.857

10.  Specific cleavage of chromatin by restriction nucleases.

Authors:  W Hörz; T Igo-Kemenes; W Pfeiffer; H G Zachau
Journal:  Nucleic Acids Res       Date:  1976-11       Impact factor: 16.971

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