Literature DB >> 12501429

Reclassification of marine Agrobacterium species: Proposals of Stappia stellulata gen. nov., comb. nov., Stappia aggregata sp. nov., nom. rev., Ruegeria atlantica gen. nov., comb. nov., Ruegeria gelatinovora comb. nov., Ruegeria algicola comb. nov., and Ahrensia kieliense gen. nov., sp. nov., nom. rev.

Yoshihito Uchino1, Aiko Hirata, Akira Yokota, Junta Sugiyama.   

Abstract

The bootstrapped 16S rDNA sequence-based neighbor-joining phylogeny has suggested that the marine species of the genus Agrobacterium have no relation to the terrestrial Agrobacterium species. Agrobacterium atlanticum IAM 14463(T) (a superscript (T)=type strain), Agrobacterium ferrugineum IAM 12616(T), Agrobacterium gelatinovorum IAM 12617(T), Agrobacterium meteori IAM 14464(T), Agrobacterium stellulatum IAM 12621(T) and IAM 12614, and the invalidly published marine species "Agrobacterium kieliense" IAM 12618 occupy an independent position in the a-subclass of the Proteobacteria. Based on 16S rDNA sequencing and on chemotaxonomic, morphological, and physiological studies, we propose the transfer of A. atlanticum, A. gelatinovorum, and Roseobacter algicola to the genus Ruegeria gen. nov. as Ruegeria atlantica comb. nov., Ruegeria gelatinovora comb. nov., and Ruegeria algicola comb. nov., respectively; of strains of A. stellulatum to the genus Stappia gen. nov. as Stappia stellulata comb. nov. and Stappia aggregata sp. nov., nom. rev., respectively; and of "A. kieliense" to the genus Ahrensia gen. nov. as Ahrensia kieliense sp. nov., nom. rev. Agrobacterium meteori is assigned to be a synonym of A. atlanticum.

Entities:  

Year:  1998        PMID: 12501429     DOI: 10.2323/jgam.44.201

Source DB:  PubMed          Journal:  J Gen Appl Microbiol        ISSN: 0022-1260            Impact factor:   1.452


  28 in total

1.  Diversity of thiosulfate-oxidizing bacteria from marine sediments and hydrothermal vents.

Authors:  A Teske; T Brinkhoff; G Muyzer; D P Moser; J Rethmeier; H W Jannasch
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

2.  Ecology, inhibitory activity, and morphogenesis of a marine antagonistic bacterium belonging to the Roseobacter clade.

Authors:  Jesper Bartholin Bruhn; Kristian Fog Nielsen; Mette Hjelm; Michael Hansen; José Bresciani; Stefan Schulz; Lone Gram
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

3.  Acuticoccus yangtzensis gen. nov., sp. nov., a novel member in the family Rhodobacteraceae, isolated from the surface water of the Yangtze Estuary.

Authors:  Lei Hou; Yao Zhang; Jia Sun; Xiabing Xie
Journal:  Curr Microbiol       Date:  2014-09-30       Impact factor: 2.188

4.  Tropodithietic acid production in Phaeobacter gallaeciensis is regulated by N-acyl homoserine lactone-mediated quorum sensing.

Authors:  Martine Berger; Alexander Neumann; Stefan Schulz; Meinhard Simon; Thorsten Brinkhoff
Journal:  J Bacteriol       Date:  2011-09-23       Impact factor: 3.490

5.  Physiological, ecological, and phylogenetic characterization of Stappia, a marine CO-oxidizing bacterial genus.

Authors:  Carolyn F Weber; Gary M King
Journal:  Appl Environ Microbiol       Date:  2006-12-01       Impact factor: 4.792

6.  Hongsoonwoonella zoysiae gen. nov., sp. nov., a new member of the family Stappiaceae isolated from a tidal mudflat.

Authors:  Soon Dong Lee; In Seop Kim; Sung-Min Kim; Hong Lim Yang; Yeong-Sik Byeon
Journal:  Arch Microbiol       Date:  2021-01-02       Impact factor: 2.552

7.  Consumption of tropospheric levels of methyl bromide by C(1) compound-utilizing bacteria and comparison to saturation kinetics.

Authors:  K D Goodwin; R K Varner; P M Crill; R S Oremland
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

8.  Identification of strains of Alcaligenes and Agrobacterium by a polyphasic approach.

Authors:  D Clermont; C Harmant; C Bizet
Journal:  J Clin Microbiol       Date:  2001-09       Impact factor: 5.948

9.  Molecular and culture-based analyses of aerobic carbon monoxide oxidizer diversity.

Authors:  Gary M King
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

10.  Biostimulation of estuarine microbiota on substrate coated agar slides: a novel approach to study diversity of autochthonous Bdellovibrio- and like organisms.

Authors:  Ashvini Chauhan; Henry N Williams
Journal:  Microb Ecol       Date:  2008-05       Impact factor: 4.552

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