Literature DB >> 12490713

Characterization of the interaction between the nucleotide exchange factor EF-Ts from nematode mitochondria and elongation factor Tu.

Takashi Ohtsuki1, Masayuki Sakurai, Aya Sato, Kimitsuna Watanabe.   

Abstract

Caenorhabditis elegans mitochondria have two elongation factor (EF)-Tu species, denoted EF-Tu1 and EF-Tu2. Recombinant nematode EF-Ts purified from Escherichia coli bound both of these molecules and also stimulated the translational activity of EF-Tu, indicating that the nematode EF-Ts homolog is a functional EF-Ts protein of mitochondria. Complexes formed by the interaction of nematode EF-Ts with EF-Tu1 and EF-Tu2 could be detected by native gel electrophoresis and purified by gel filtration. Although the nematode mitochondrial (mt) EF-Tu molecules are extremely unstable and easily form aggregates, native gel electrophoresis and gel filtration analysis revealed that EF-Tu.EF-Ts complexes are significantly more soluble. This indicates that nematode EF-Ts can be used to stabilize homologous EF-Tu molecules for experimental purposes. The EF-Ts bound to two eubacterial EF-Tu species (E.coli and Thermus thermophilus). Although the EF-Ts did not bind to bovine mt EF-Tu, it could bind to a chimeric nematode-bovine EF-Tu molecule containing domains 1 and 2 from bovine mt EF-Tu. Thus, the nematode EF-Ts appears to have a broad specificity for EF-Tu molecules from different species.

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Year:  2002        PMID: 12490713      PMCID: PMC140056          DOI: 10.1093/nar/gkf679

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

1.  An "elongated" translation elongation factor Tu for truncated tRNAs in nematode mitochondria.

Authors:  T Ohtsuki; C Takemoto; G Kawai; T Ueda; K Kita; S Kojima; Y Kaziro; J Nyborg; K Watanabe
Journal:  J Biol Chem       Date:  2001-03-21       Impact factor: 5.157

2.  Elongation factor Ts can act as a steric chaperone by increasing the solubility of nucleotide binding-impaired elongation factor-Tu.

Authors:  I M Krab; R te Biesebeke; A Bernardi; A Parmeggiani
Journal:  Biochemistry       Date:  2001-07-24       Impact factor: 3.162

3.  The minimal tRNA: unique structure of Ascaris suum mitochondrial tRNA(Ser)(UCU) having a short T arm and lacking the entire D arm.

Authors:  Takashi Ohtsuki; Gota Kawai; Kimitsuna Watanabe
Journal:  FEBS Lett       Date:  2002-03-06       Impact factor: 4.124

4.  Affinity purification of elongation factors Tu and Ts.

Authors:  G R Jacobson; J P Rosenbusch
Journal:  FEBS Lett       Date:  1977-07-01       Impact factor: 4.124

5.  Interactions between the elongation factors: the displacement of GPD from the TU-GDP complex by factor Ts.

Authors:  D L Miller; H Weissbach
Journal:  Biochem Biophys Res Commun       Date:  1970-03-27       Impact factor: 3.575

6.  Bovine mitochondrial protein synthesis elongation factors. Identification and initial characterization of an elongation factor Tu-elongation factor Ts complex.

Authors:  C J Schwartzbach; L L Spremulli
Journal:  J Biol Chem       Date:  1989-11-15       Impact factor: 5.157

7.  Kinetic mechanism of elongation factor Ts-catalyzed nucleotide exchange in elongation factor Tu.

Authors:  Kirill B Gromadski; Hans-Joachim Wieden; Marina V Rodnina
Journal:  Biochemistry       Date:  2002-01-08       Impact factor: 3.162

8.  Bovine mitochondrial ribosomes. Elongation factor specificity.

Authors:  S L Eberly; V Locklear; L L Spremulli
Journal:  J Biol Chem       Date:  1985-07-25       Impact factor: 5.157

9.  A unique serine-specific elongation factor Tu found in nematode mitochondria.

Authors:  Takashi Ohtsuki; Aya Sato; Yoh-ichi Watanabe; Kimitsuna Watanabe
Journal:  Nat Struct Biol       Date:  2002-09

10.  Studies on polypeptide-chain-elongation factors from an extreme thermophile, Thermus thermophilus HB8. 2. Catalytic properties.

Authors:  K Arai; N Arai; S Nakamura; T Oshima; Y Kaziro
Journal:  Eur J Biochem       Date:  1978-12
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  6 in total

1.  Analysis of the functional consequences of lethal mutations in mitochondrial translational elongation factors.

Authors:  Kenta Akama; Brooke E Christian; Christie N Jones; Takuya Ueda; Nono Takeuchi; Linda L Spremulli
Journal:  Biochim Biophys Acta       Date:  2010-05-06

2.  A protein extension to shorten RNA: elongated elongation factor-Tu recognizes the D-arm of T-armless tRNAs in nematode mitochondria.

Authors:  Masayuki Sakurai; Yoh-ichi Watanabe; Kimitsuna Watanabe; Takashi Ohtsuki
Journal:  Biochem J       Date:  2006-10-15       Impact factor: 3.857

3.  Substrate tRNA recognition mechanism of a multisite-specific tRNA methyltransferase, Aquifex aeolicus Trm1, based on the X-ray crystal structure.

Authors:  Takako Awai; Anna Ochi; Toru Sengoku; Akira Hirata; Yoshitaka Bessho; Shigeyuki Yokoyama; Hiroyuki Hori
Journal:  J Biol Chem       Date:  2011-08-15       Impact factor: 5.157

4.  The mitochondrial genome of Xiphinema americanum sensu stricto (Nematoda: Enoplea): considerable economization in the length and structural features of encoded genes.

Authors:  Y He; J Jones; M Armstrong; F Lamberti; M Moens
Journal:  J Mol Evol       Date:  2005-11-02       Impact factor: 3.973

5.  Magnetic techniques for the isolation and purification of proteins and peptides.

Authors:  Ivo Safarik; Mirka Safarikova
Journal:  Biomagn Res Technol       Date:  2004-11-26

6.  Modification at position 9 with 1-methyladenosine is crucial for structure and function of nematode mitochondrial tRNAs lacking the entire T-arm.

Authors:  Masayuki Sakurai; Takashi Ohtsuki; Kimitsuna Watanabe
Journal:  Nucleic Acids Res       Date:  2005-03-21       Impact factor: 16.971

  6 in total

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