Literature DB >> 12485106

Correlated random networks.

Johannes Berg1, Michael Lässig.   

Abstract

We develop a statistical theory of networks. A network is a set of vertices and links given by its adjacency matrix c, and the relevant statistical ensembles are defined in terms of a partition function Z= summation operator exp([-betaH(c)]. The simplest cases are uncorrelated random networks such as the well-known Erdös-Rényi graphs. Here we study more general interactions H(c) which lead to correlations, for example, between the connectivities of adjacent vertices. In particular, such correlations occur in optimized networks described by partition functions in the limit beta--> infinity. They are argued to be a crucial signature of evolutionary design in biological networks.

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Year:  2002        PMID: 12485106     DOI: 10.1103/PhysRevLett.89.228701

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  8 in total

1.  Local graph alignment and motif search in biological networks.

Authors:  Johannes Berg; Michael Lässig
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-24       Impact factor: 11.205

2.  Incomplete and noisy network data as a percolation process.

Authors:  Michael P H Stumpf; Carsten Wiuf
Journal:  J R Soc Interface       Date:  2010-04-08       Impact factor: 4.118

3.  Functional brain networks: great expectations, hard times and the big leap forward.

Authors:  David Papo; Massimiliano Zanin; José Angel Pineda-Pardo; Stefano Boccaletti; Javier M Buldú
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2014-10-05       Impact factor: 6.237

4.  Statistical inference for valued-edge networks: the generalized exponential random graph model.

Authors:  Bruce A Desmarais; Skyler J Cranmer
Journal:  PLoS One       Date:  2012-01-19       Impact factor: 3.240

5.  The effects of incomplete protein interaction data on structural and evolutionary inferences.

Authors:  Eric de Silva; Thomas Thorne; Piers Ingram; Ino Agrafioti; Jonathan Swire; Carsten Wiuf; Michael P H Stumpf
Journal:  BMC Biol       Date:  2006-11-03       Impact factor: 7.431

6.  Structure and evolution of protein interaction networks: a statistical model for link dynamics and gene duplications.

Authors:  Johannes Berg; Michael Lässig; Andreas Wagner
Journal:  BMC Evol Biol       Date:  2004-11-27       Impact factor: 3.260

7.  Effects of random rewiring on the degree correlation of scale-free networks.

Authors:  Jing Qu; Sheng-Jun Wang; Marko Jusup; Zhen Wang
Journal:  Sci Rep       Date:  2015-10-20       Impact factor: 4.379

8.  The diminishing role of hubs in dynamical processes on complex networks.

Authors:  Rick Quax; Andrea Apolloni; Peter M A Sloot
Journal:  J R Soc Interface       Date:  2013-09-04       Impact factor: 4.118

  8 in total

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