Literature DB >> 12483598

Application of the partial 16S rDNA sequence as an index for rapid identification of species in the genus Bacillus.

Keiichi Goto1, Tomoko Omura, Yukihiko Hara, Yoshito Sadaie.   

Abstract

A comparison of 16S rRNA gene (rDNA) sequences was made among type strains of 69 Bacillus species approved in the International Journal of Systematic Bacteriology (IJSB) until 1998. The results suggested that 5' end region (approx. 275 bp) was the hypervariant region (HV region) in the gene and was highly specific for each type strain. Furthermore, a sequence analysis of the HV region of Bacillus strains revealed that this region was highly conserved within the species. These results indicate that the HV region is a useful index for the identification or grouping of Bacillus species.

Year:  2000        PMID： 12483598     DOI： 10.2323/jgam.46.1

Source DB:  PubMed          Journal:  J Gen Appl Microbiol        ISSN： 0022-1260            Impact factor:   1.452


  34 in total

1.  Bacterial diversity of the Inner Mongolian Baer Soda Lake as revealed by 16S rRNA gene sequence analyses.

Authors:  Yanhe Ma; Weizhou Zhang; Yanfen Xue; Peijin Zhou; Antonio Ventosa; William D Grant
Journal:  Extremophiles       Date:  2003-10-01       Impact factor: 2.395

2.  Reassessment of sequence-based targets for identification of bacillus species.

Authors:  K S Blackwood; C Y Turenne; D Harmsen; A M Kabani
Journal:  J Clin Microbiol       Date:  2004-04       Impact factor: 5.948

3.  Intense association of non-culturable endophytic bacteria with antibiotic-cleansed in vitro watermelon and their activation in degenerating cultures.

Authors:  Pious Thomas
Journal:  Plant Cell Rep       Date:  2011-10-29       Impact factor: 4.570

4.  Halotolerant aerobic heterotrophic bacteria from the Great Salt Plains of Oklahoma.

Authors:  T M Caton; L R Witte; H D Ngyuen; J A Buchheim; M A Buchheim; M A Schneegurt
Journal:  Microb Ecol       Date:  2004-11-16       Impact factor: 4.552

5.  Isolation and molecular characterization of chitinase-deficient Bacillus licheniformis strains capable of deproteinization of shrimp shell waste to obtain highly viscous chitin.

Authors:  Jens Waldeck; Gabriele Daum; Bernward Bisping; Friedhelm Meinhardt
Journal:  Appl Environ Microbiol       Date:  2006-10-06       Impact factor: 4.792

6.  Phylogenetic profiling of bacterial community from two intimately located sites in Balramgari, North-East coast of India.

Authors:  Arvind Kumar Gupta; Ashraf Yusuf Rangrez; Pankaj Verma; Anil Chatterji; Yogesh S Shouche
Journal:  Indian J Microbiol       Date:  2009-06-10       Impact factor: 2.461

7.  Antagonism influences assembly of a Bacillus guild in a local community and is depicted as a food-chain network.

Authors:  Rocío-Anaís Pérez-Gutiérrez; Varinia López-Ramírez; África Islas; Luis David Alcaraz; Ismael Hernández-González; Beatriz Carely Luna Olivera; Moisés Santillán; Luis E Eguiarte; Valeria Souza; Michael Travisano; Gabriela Olmedo-Alvarez
Journal:  ISME J       Date:  2012-10-25       Impact factor: 10.302

8.  Production of phytohormones, siderophores and population fluctuation of two root-promoting rhizobacteria in Eucalyptus globulus cuttings.

Authors:  Katy Díaz Peralta; Támara Araya; Sofía Valenzuela; Katherine Sossa; Miguel Martínez; Hugo Peña-Cortés; Eugenio Sanfuentes
Journal:  World J Microbiol Biotechnol       Date:  2012-01-15       Impact factor: 3.312

9.  Biofilm-specific cross-species induction of antimicrobial compounds in bacilli.

Authors:  Liming Yan; Kenneth G Boyd; David R Adams; J Grant Burgess
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

10.  An antibiotic, heavy metal resistant and halotolerant Bacillus cereus SIU1 and its thermoalkaline protease.

Authors:  Sanjay K Singh; Vinayak R Tripathi; Rakesh K Jain; Surendra Vikram; Satyendra K Garg
Journal:  Microb Cell Fact       Date:  2010-07-21       Impact factor: 5.328
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