Literature DB >> 12481263

Complete mitochondrial DNA sequence of a tadpole shrimp (Triops cancriformis) and analysis of museum samples.

Kazuo Umetsu1, Naruki Iwabuchi, Isao Yuasa, Naruya Saitou, Paul F Clark, Geoff Boxshall, Motoki Osawa, Keiji Igarashi.   

Abstract

The complete mitochondrial DNA (mtNDA) of the tadpole shrimp Triops cancriformis was sequenced. The sequence consisted of 15,101 bp with an A+T content of 69%. Its gene arrangement was identical with those sequences of the water flea (Daphnia pulex) and giant tiger prawn (Penaeus monodon), whereas it differed from that of the brine shrimp (Artemia franciscana) in the arrangement of its genes for tRNAs. Phylogenetic analysis revealed T. cancriformis to be more closely related to the water flea than to the brine shrimp and giant tiger prawn. We also compared the 16S rRNA sequences of five formalin-fixed tadpole shrimps that had been collected in five different locations and stored in a museum. The sequence divergence was in the range of 0-1.51%, suggesting that those samples were closely related to each other.

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Year:  2002        PMID: 12481263     DOI: 10.1002/elps.200290024

Source DB:  PubMed          Journal:  Electrophoresis        ISSN: 0173-0835            Impact factor:   3.535


  5 in total

1.  Complete mitochondrial DNA sequences of the decapod crustaceans Pseudocarcinus gigas (Menippidae) and Macrobrachium rosenbergii (Palaemonidae).

Authors:  Adam D Miller; Nicholas P Murphy; Christopher P Burridge; Christopher M Austin
Journal:  Mar Biotechnol (NY)       Date:  2005 Jul-Aug       Impact factor: 3.619

2.  Extensive gene order rearrangement in the mitochondrial genome of the centipede Scutigera coleoptrata.

Authors:  Enrico Negrisolo; Alessandro Minelli; Giorgio Valle
Journal:  J Mol Evol       Date:  2004-04       Impact factor: 2.395

3.  Precise mapping and dynamics of tRNA-derived fragments (tRFs) in the development of Triops cancriformis (tadpole shrimp).

Authors:  Yuka Hirose; Kahori T Ikeda; Emiko Noro; Kiriko Hiraoka; Masaru Tomita; Akio Kanai
Journal:  BMC Genet       Date:  2015-07-14       Impact factor: 2.797

4.  Mitochondrial genome diversity and evolution in Branchiopoda (Crustacea).

Authors:  Andrea Luchetti; Giobbe Forni; Alyza M Skaist; Sarah J Wheelan; Barbara Mantovani
Journal:  Zoological Lett       Date:  2019-05-27       Impact factor: 2.836

5.  Systematic sequencing of mRNA from the Antarctic krill (Euphausia superba) and first tissue specific transcriptional signature.

Authors:  Cristiano De Pittà; Cristiano Bertolucci; Gabriella M Mazzotta; Filippo Bernante; Giorgia Rizzo; Barbara De Nardi; Alberto Pallavicini; Gerolamo Lanfranchi; Rodolfo Costa
Journal:  BMC Genomics       Date:  2008-01-28       Impact factor: 3.969

  5 in total

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