Literature DB >> 12473392

Bagging tree classifiers for laser scanning images: a data- and simulation-based strategy.

Torsten Hothorn1, Berthold Lausen.   

Abstract

Diagnosis based on medical image data is common in medical decision making and clinical routine. We discuss a strategy to derive a classifier with good performance on clinical image data and to justify the properties of the classifier by an adapted simulation model of image data. We focus on the problem of classifying eyes as normal or glaucomatous based on 62 routine explanatory variables derived from laser scanning images of the optic nerve head. As learning sample we use a case-control study of 98 normal and 98 glaucomatous subjects matched by age and sex. Aggregating multiple unstable classifiers allows substantial reduction of misclassification error in many applications and bench mark problems. We investigate the performance of various classifiers for the clinical learning sample as well as for a simulation model of eye morphologies. Bagged classification trees (bagged-CTREE) are compared to single classification trees and linear discriminant analysis (LDA). We additionally compare three estimators of misclassification error: 10-fold cross-validation, the 0.632+ bootstrap and the out-of-bag estimate. In summary, the application of our strategy of a knowledge-based decision support shows that bagged classification trees perform best for glaucoma classification.

Entities:  

Mesh:

Year:  2003        PMID: 12473392     DOI: 10.1016/s0933-3657(02)00085-4

Source DB:  PubMed          Journal:  Artif Intell Med        ISSN: 0933-3657            Impact factor:   5.326


  10 in total

1.  Diagnostic value of multifocal VEP using cross-validation and noise reduction in glaucoma research.

Authors:  Thomas Lindenberg; Andrea Peters; Folkert K Horn; Berthold Lausen; Matthias Korth
Journal:  Graefes Arch Clin Exp Ophthalmol       Date:  2004-04-15       Impact factor: 3.117

2.  Determination of CERES TOA fluxes using Machine learning algorithms. Part I: Classification and retrieval of CERES cloudy and clear scenes.

Authors:  Bijoy Vengasseril Thampi; Takmeng Wong; Constantin Lukashin; Norman G Loeb
Journal:  J Atmos Ocean Technol       Date:  2017-10-01       Impact factor: 2.075

3.  Glaucoma classification model based on GDx VCC measured parameters by decision tree.

Authors:  Mei-Ling Huang; Hsin-Yi Chen
Journal:  J Med Syst       Date:  2009-07-04       Impact factor: 4.460

4.  Ordinal response prediction using bootstrap aggregation, with application to a high-throughput methylation data set.

Authors:  K J Archer; V R Mas
Journal:  Stat Med       Date:  2009-12-20       Impact factor: 2.373

5.  Energy bagging tree.

Authors:  Taoyun Cao; Xueqin Wang; Heping Zhang
Journal:  Stat Interface       Date:  2016       Impact factor: 0.582

6.  Predicting progressive glaucomatous optic neuropathy using baseline standard automated perimetry data.

Authors:  Shaban Demirel; Brad Fortune; Juanjuan Fan; Richard A Levine; Rodrigo Torres; Hau Nguyen; Steven L Mansberger; Stuart K Gardiner; George A Cioffi; Chris A Johnson
Journal:  Invest Ophthalmol Vis Sci       Date:  2008-10-20       Impact factor: 4.799

7.  Relevance vector machine and support vector machine classifier analysis of scanning laser polarimetry retinal nerve fiber layer measurements.

Authors:  Christopher Bowd; Felipe A Medeiros; Zuohua Zhang; Linda M Zangwill; Jiucang Hao; Te-Won Lee; Terrence J Sejnowski; Robert N Weinreb; Michael H Goldbaum
Journal:  Invest Ophthalmol Vis Sci       Date:  2005-04       Impact factor: 4.799

8.  Glaucomatous patterns in Frequency Doubling Technology (FDT) perimetry data identified by unsupervised machine learning classifiers.

Authors:  Christopher Bowd; Robert N Weinreb; Madhusudhanan Balasubramanian; Intae Lee; Giljin Jang; Siamak Yousefi; Linda M Zangwill; Felipe A Medeiros; Christopher A Girkin; Jeffrey M Liebmann; Michael H Goldbaum
Journal:  PLoS One       Date:  2014-01-30       Impact factor: 3.240

9.  Integration of genomic, transcriptomic and proteomic data identifies two biologically distinct subtypes of invasive lobular breast cancer.

Authors:  Magali Michaut; Suet-Feung Chin; Ian Majewski; Tesa M Severson; Tycho Bismeijer; Leanne de Koning; Justine K Peeters; Philip C Schouten; Oscar M Rueda; Astrid J Bosma; Finbarr Tarrant; Yue Fan; Beilei He; Zheng Xue; Lorenza Mittempergher; Roelof J C Kluin; Jeroen Heijmans; Mireille Snel; Bernard Pereira; Andreas Schlicker; Elena Provenzano; Hamid Raza Ali; Alexander Gaber; Gillian O'Hurley; Sophie Lehn; Jettie J F Muris; Jelle Wesseling; Elaine Kay; Stephen John Sammut; Helen A Bardwell; Aurélie S Barbet; Floriane Bard; Caroline Lecerf; Darran P O'Connor; Daniël J Vis; Cyril H Benes; Ultan McDermott; Mathew J Garnett; Iris M Simon; Karin Jirström; Thierry Dubois; Sabine C Linn; William M Gallagher; Lodewyk F A Wessels; Carlos Caldas; Rene Bernards
Journal:  Sci Rep       Date:  2016-01-05       Impact factor: 4.379

10.  Prediction of prognosis and survival of patients with gastric cancer by a weighted improved random forest model: an application of machine learning in medicine.

Authors:  Cheng Xu; Jing Wang; Tianlong Zheng; Yue Cao; Fan Ye
Journal:  Arch Med Sci       Date:  2021-04-10       Impact factor: 3.707

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.