Literature DB >> 12468002

An efficient method for studying short-term plasticity with random impulse train stimuli.

Ghassan Gholmieh1, Spiros Courellis, Vasilis Marmarelis, Theodore Berger.   

Abstract

In this article, we introduce an efficient method that models quantitatively nonlinear dynamics associated with short-term plasticity (STP) in biological neural systems. It is based on the Voterra-Wiener modeling approach adapted for special stimulus/response datasets. The stimuli are random impulse trains (RITs) of fixed amplitude and Poisson distributed, variable interimpulse intervals. The class of stimuli, we use can be viewed as a hybrid between the paired impulse approach (variable interimpulse interval between two input impulses) and the fixed frequency approach (impulses repeated at fixed intervals, varying in frequency from one stimulus dataset to the next). The responses are sequences of population spike amplitudes of variable size and are assumed to be contemporaneous with the corresponding impulses in the RITs they are evoked by. The nonlinear dynamics of the mechanisms underlying STP are captured by kernels used to create compact STP models with predictive capabilities. Compared to similar methods in the literature, the method presented in this article provides a comprehensive model of STP with considerable improvement in prediction accuracy and requires shorter experimental data collection time.

Mesh:

Year:  2002        PMID: 12468002     DOI: 10.1016/s0165-0270(02)00164-4

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  7 in total

1.  Modeling the nonlinear dynamic interactions of afferent pathways in the dentate gyrus of the hippocampus.

Authors:  Angelika Dimoka; Spiros H Courellis; Vasilis Z Marmarelis; Theodore W Berger
Journal:  Ann Biomed Eng       Date:  2008-02-26       Impact factor: 3.934

2.  Modeling the nonlinear properties of the in vitro hippocampal perforant path-dentate system using multielectrode array technology.

Authors:  Angelika Dimoka; Spiros H Courellis; Ghassan I Gholmieh; Vasilis Z Marmarelis; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2008-02       Impact factor: 4.538

3.  Boolean modeling of neural systems with point-process inputs and outputs. Part I: theory and simulations.

Authors:  Vasilis Z Marmarelis; Theodoros P Zanos; Theodore W Berger
Journal:  Ann Biomed Eng       Date:  2009-06-11       Impact factor: 3.934

4.  Nonlinear dynamic modeling of synaptically driven single hippocampal neuron intracellular activity.

Authors:  Ude Lu; Dong Song; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2011-01-13       Impact factor: 4.538

5.  Nonlinear dynamic modeling of neuron action potential threshold during synaptically driven broadband intracellular activity.

Authors:  Ude Lu; Shane M Roach; Dong Song; Theodore W Berger
Journal:  IEEE Trans Biomed Eng       Date:  2011-12-06       Impact factor: 4.538

6.  Boolean modeling of neural systems with point-process inputs and outputs. Part II: Application to the rat hippocampus.

Authors:  Theodoros P Zanos; Robert E Hampson; Samuel E Deadwyler; Theodore W Berger; Vasilis Z Marmarelis
Journal:  Ann Biomed Eng       Date:  2009-06-05       Impact factor: 3.934

7.  Nonlinear modeling of causal interrelationships in neuronal ensembles.

Authors:  Theodoros P Zanos; Spiros H Courellis; Theodore W Berger; Robert E Hampson; Sam A Deadwyler; Vasilis Z Marmarelis
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2008-08       Impact factor: 3.802

  7 in total

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