Literature DB >> 12464241

Crystal structures of cyanide complexes of P450cam and the oxygenase domain of inducible nitric oxide synthase-structural models of the short-lived oxygen complexes.

Roman Fedorov1, Dipak K Ghosh, Ilme Schlichting.   

Abstract

The crystal structure of the ternary cyanide complex of P450cam and camphor was determined to 1.8A resolution and found to be identical with the structure of the active oxygen complex [I. Schlichting et al., 2000, Science 287, 1615]. Notably, cyanide binds in a bent mode and induces the active conformation that is characterized by the presence of two water molecules and a flip of the carbonyl of the conserved Asp251. The structure of the ternary complex of cyanide, L-arginine, and the oxygenase domain of inducible nitric oxide synthase was determined to 2.4A resolution. Cyanide binds essentially linearly, interacts with L-Arg, and induces the binding of a water molecule at the active site. This water is positioned by backbone interactions, located 2.8A from the nitrogen atom of cyanide, and could provide a proton required for O-O bond scission in the hydroxylation reaction of nitric oxide synthase.

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Year:  2003        PMID: 12464241     DOI: 10.1016/s0003-9861(02)00555-6

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  20 in total

1.  Structures of nitric oxide synthase isoforms complexed with the inhibitor AR-R17477 suggest a rational basis for specificity and inhibitor design.

Authors:  Roman Fedorov; Ryan Vasan; Dipak K Ghosh; Ilme Schlichting
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-07       Impact factor: 11.205

Review 2.  Conformational plasticity and structure/function relationships in cytochromes P450.

Authors:  Thomas C Pochapsky; Sophia Kazanis; Marina Dang
Journal:  Antioxid Redox Signal       Date:  2010-10       Impact factor: 8.401

3.  Crystal structures of substrate-free and nitrosyl cytochrome P450cin: implications for O(2) activation.

Authors:  Yarrow Madrona; Sarvind Tripathi; Huiying Li; Thomas L Poulos
Journal:  Biochemistry       Date:  2012-08-07       Impact factor: 3.162

4.  Mechanistic studies of inactivation of inducible nitric oxide synthase by amidines.

Authors:  Wei Tang; Huiying Li; Thomas L Poulos; Richard B Silverman
Journal:  Biochemistry       Date:  2015-04-07       Impact factor: 3.162

5.  Structural studies of constitutive nitric oxide synthases with diatomic ligands bound.

Authors:  Huiying Li; Jotaro Igarashi; Joumana Jamal; Weiping Yang; Thomas L Poulos
Journal:  J Biol Inorg Chem       Date:  2006-06-28       Impact factor: 3.358

Review 6.  Heme enzyme structure and function.

Authors:  Thomas L Poulos
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

Review 7.  A novel type of allosteric regulation: functional cooperativity in monomeric proteins.

Authors:  Ilia G Denisov; Stephen G Sligar
Journal:  Arch Biochem Biophys       Date:  2012-01-08       Impact factor: 4.013

8.  Effect of Redox Partner Binding on Cytochrome P450 Conformational Dynamics.

Authors:  Dipanwita Batabyal; Logan S Richards; Thomas L Poulos
Journal:  J Am Chem Soc       Date:  2017-09-07       Impact factor: 15.419

9.  Mutation in the flavin mononucleotide domain modulates magnetic circular dichroism spectra of the iNOS ferric cyano complex in a substrate-specific manner.

Authors:  Joseph Sempombe; Mary Grace I Galinato; Bradley O Elmore; Weihong Fan; J Guy Guillemette; Nicolai Lehnert; Martin L Kirk; Changjian Feng
Journal:  Inorg Chem       Date:  2011-06-30       Impact factor: 5.165

10.  Synergistic effects of mutations in cytochrome P450cam designed to mimic CYP101D1.

Authors:  Dipanwita Batabyal; Huiying Li; Thomas L Poulos
Journal:  Biochemistry       Date:  2013-07-31       Impact factor: 3.162

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