Literature DB >> 12457997

Genotyping single-nucleotide polymorphisms by matrix-assisted laser-desorption/ionization time-of-flight mass spectrometry.

Sascha Sauer1, Ivo G Gut.   

Abstract

In recent years matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI) has emerged as a very powerful method for genotyping single nucleotide polymorphisms. The accuracy, speed of data accumulation, and data structure are the major features of MALDI. Several SNP genotyping methods have been implemented with a high degree of automation and are being applied for large-scale association studies. Most methods for SNP genotyping using MALDI mass spectrometric detection and their potential application for high-throughput are reviewed here.

Mesh:

Year:  2002        PMID: 12457997     DOI: 10.1016/s1570-0232(02)00692-x

Source DB:  PubMed          Journal:  J Chromatogr B Analyt Technol Biomed Life Sci        ISSN: 1570-0232            Impact factor:   3.205


  14 in total

1.  MALDI mass spectrometry analysis of single nucleotide polymorphisms by photocleavage and charge-tagging.

Authors:  Sascha Sauer; Hans Lehrach; Richard Reinhardt
Journal:  Nucleic Acids Res       Date:  2003-06-01       Impact factor: 16.971

2.  Technologies in the Whole-Genome Age: MALDI-TOF-Based Genotyping.

Authors:  Nicolas Vogel; Katrin Schiebel; Andreas Humeny
Journal:  Transfus Med Hemother       Date:  2009-07-10       Impact factor: 3.747

Review 3.  Mass spectrometry tools for the classification and identification of bacteria.

Authors:  Sascha Sauer; Magdalena Kliem
Journal:  Nat Rev Microbiol       Date:  2010-01       Impact factor: 60.633

4.  Role of rare variants in undetermined multiple adenomatous polyposis and early-onset colorectal cancer.

Authors:  Jérémie H Lefevre; Carolina Bonilla; Chrystelle Colas; Bruce Winney; Elaine Johnstone; Susan Tonks; Tammy Day; Katarzyna Hutnik; Abdelhamid Boumertit; Florent Soubrier; Rachel Midgley; David Kerr; Yann Parc; Walter F Bodmer
Journal:  J Hum Genet       Date:  2012-08-09       Impact factor: 3.172

5.  3-Hydroxycoumarin as a new matrix for matrix-assisted laser desorption/ionization time-of-flight mass spectrometry of DNA.

Authors:  Zhenying Zhang; Lihua Zhou; Shankai Zhao; Huimin Deng; Qinying Deng
Journal:  J Am Soc Mass Spectrom       Date:  2006-08-14       Impact factor: 3.109

6.  Molecular typing for the Indian blood group associated 252G>C single nucleotide polymorphism in a selected cohort of Australian blood donors.

Authors:  Genghis H Lopez; Rhiannon S Mcbean; Brett Wilson; Darryl L Irwin; Yew-Wah Liew; Catherine A Hyland; Robert L Flower
Journal:  Blood Transfus       Date:  2014-06-05       Impact factor: 3.443

7.  A multiplex allele-specific primer extension assay for forensically informative SNPs distributed throughout the mitochondrial genome.

Authors:  Peter M Vallone; Rebecca S Just; Michael D Coble; John M Butler; Thomas J Parsons
Journal:  Int J Legal Med       Date:  2004-02-04       Impact factor: 2.686

8.  Association of sirtuin 1 (SIRT1) gene SNPs and transcript expression levels with severe obesity.

Authors:  Stephen J Clark; Mario Falchi; Bob Olsson; Peter Jacobson; Stéphane Cauchi; Beverley Balkau; Michel Marre; Olivier Lantieri; Johanna C Andersson; Margareta Jernås; Timothy J Aitman; Sylvia Richardson; Lars Sjöström; Hang Y Wong; Lena M S Carlsson; Philippe Froguel; Andrew J Walley
Journal:  Obesity (Silver Spring)       Date:  2011-07-14       Impact factor: 5.002

9.  Aetiology and epidemiology of human cryptosporidiosis cases in Galicia (NW Spain), 2000-2008.

Authors:  J L Abal-Fabeiro; X Maside; J Llovo; C Bartolomé
Journal:  Epidemiol Infect       Date:  2015-02-20       Impact factor: 4.434

10.  Association between the DTNBP1 gene and intelligence: a case-control study in young patients with schizophrenia and related disorders and unaffected siblings.

Authors:  Janneke R Zinkstok; Odette de Wilde; Therese A M J van Amelsvoort; Michael W Tanck; Frank Baas; Don H Linszen
Journal:  Behav Brain Funct       Date:  2007-04-20       Impact factor: 3.759

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