Literature DB >> 12457564

Evolutionarily different RNA motifs and RNA-protein complexes to achieve selenoprotein synthesis.

Alain Krol1.   

Abstract

A wealth of RNAs or RNA motifs are instrumental in controlling a variety of post-transcriptional or post-translational regulations. In this regard, selenocysteine incorporation in response to a redefined UGA stop codon certainly constitutes an intriguing and fascinating process. Translation elongation factors specialized for selenocysteine are needed to decode UGA selenocysteine codons. Discrimination between UGA selenocysteine and UGA stop codons also necessitates selenoprotein mRNA hairpins, called SECIS, that are internal to the coding frame in eubacteria or contained in the 3' untranslated regions in archaea/eukaryotes. This dichotomy leads to SECIS RNAs with distinct sequences and structures that tether the specialized translation elongation factor in a direct or indirect fashion, depending on the location of the SECIS RNA. The scope of this review is to bring a sharper focus on the SECIS RNA structures and SECIS RNA-protein complexes involved. Obviously, the examples described here highlight once again the versatility in form and function of RNA.

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Year:  2002        PMID: 12457564     DOI: 10.1016/s0300-9084(02)01405-0

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  35 in total

Review 1.  Regulation of gene expression by stop codon recoding: selenocysteine.

Authors:  Paul R Copeland
Journal:  Gene       Date:  2003-07-17       Impact factor: 3.688

2.  A selenocysteine tRNA and SECIS element in Plasmodium falciparum.

Authors:  Tobias Mourier; Arnab Pain; Bart Barrell; Sam Griffiths-Jones
Journal:  RNA       Date:  2005-02       Impact factor: 4.942

Review 3.  Incorporation of selenocysteine into proteins using peptide ligation.

Authors:  Robert J Hondal
Journal:  Protein Pept Lett       Date:  2005-11       Impact factor: 1.890

4.  Evolutionary patterns of non-coding RNAs.

Authors:  Athanasius F Bompfünewerer; Christoph Flamm; Claudia Fried; Guido Fritzsch; Ivo L Hofacker; Jörg Lehmann; Kristin Missal; Axel Mosig; Bettina Müller; Sonja J Prohaska; Bärbel M R Stadler; Peter F Stadler; Andrea Tanzer; Stefan Washietl; Christina Witwer
Journal:  Theory Biosci       Date:  2005-04       Impact factor: 1.919

5.  Computational prediction of RNA structural motifs involved in posttranscriptional regulatory processes.

Authors:  Michal Rabani; Michael Kertesz; Eran Segal
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-24       Impact factor: 11.205

6.  Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota.

Authors:  Yang Liu; Zhichao Zhou; Jie Pan; Brett J Baker; Ji-Dong Gu; Meng Li
Journal:  ISME J       Date:  2018-02-14       Impact factor: 10.302

Review 7.  On elongation factor eEFSec, its role and mechanism during selenium incorporation into nascent selenoproteins.

Authors:  Miljan Simonović; Anupama K Puppala
Journal:  Biochim Biophys Acta Gen Subj       Date:  2018-03-17       Impact factor: 3.770

Review 8.  Selenium and cancer: biomarkers of selenium status and molecular action of selenium supplements.

Authors:  Jolanta Gromadzińska; Edyta Reszka; Katharina Bruzelius; Wojciech Wasowicz; Björn Akesson
Journal:  Eur J Nutr       Date:  2008-05       Impact factor: 5.614

9.  Selenoprofiles: profile-based scanning of eukaryotic genome sequences for selenoprotein genes.

Authors:  M Mariotti; R Guigó
Journal:  Bioinformatics       Date:  2010-09-21       Impact factor: 6.937

10.  Factors and selenocysteine insertion sequence requirements for the synthesis of selenoproteins from a gram-positive anaerobe in Escherichia coli.

Authors:  Torsten Gursinsky; Daniel Gröbe; Angelika Schierhorn; Jana Jäger; Jan R Andreesen; Brigitte Söhling
Journal:  Appl Environ Microbiol       Date:  2007-12-28       Impact factor: 4.792

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