Literature DB >> 12448720

Breathing metals as a way of life: geobiology in action.

Kenneth H Nealson1, Andrea Belz, Brent McKee.   

Abstract

Many microbes have the ability to reduce transition metals, coupling this reduction to the oxidation of energy sources in a dissimilatory fashion. Because of their abundance, iron and manganese have been extensively studied, and it is well established that reduction of Mn and Fe account for significant turnover of organic carbon in many environments. In addition, many of the dissimilatory metal reducing bacteria (DMRB) also reduce other metals, including toxic metals like Cr(VI), and radioactive contaminants like U(VI), raising the expectations that these processes can be used for bioremediation. The processes involved in metal reduction remain mysterious, and often progress is slow, as nearly all iron and manganese oxides are solids, which offer particular challenges with regard to imaging and chemical measurements. In particular, the interactions that occur at the bacteria-mineral interfaces are not yet clearly elucidated. One DMRB, Shewanella oneidensis MR-I offers the advantage that its genome has recently been sequenced, and with the availability of its genomic sequence, several aspects of its metal reducing abilities are now beginning to be seen. As these studies progress, it should be possible to separate several processes involved with metal reduction, including surface recognition, attachment, metal destabilization and reduction, and secondary mineral formation.

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Year:  2002        PMID: 12448720     DOI: 10.1023/a:1020518818647

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  46 in total

1.  Indirect modulation of the intracellular c-Di-GMP level in Shewanella oneidensis MR-1 by MxdA.

Authors:  Shauna Rakshe; Maija Leff; Alfred M Spormann
Journal:  Appl Environ Microbiol       Date:  2011-01-28       Impact factor: 4.792

Review 2.  Microbial genomics and the periodic table.

Authors:  Lawrence P Wackett; Anthony G Dodge; Lynda B M Ellis
Journal:  Appl Environ Microbiol       Date:  2004-02       Impact factor: 4.792

3.  Microbial community succession during lactate amendment and electron acceptor limitation reveals a predominance of metal-reducing Pelosinus spp.

Authors:  Jennifer J Mosher; Tommy J Phelps; Mircea Podar; Richard A Hurt; James H Campbell; Meghan M Drake; James G Moberly; Christopher W Schadt; Steven D Brown; Terry C Hazen; Adam P Arkin; Anthony V Palumbo; Boris A Faybishenko; Dwayne A Elias
Journal:  Appl Environ Microbiol       Date:  2012-01-20       Impact factor: 4.792

Review 4.  Genes and enzymes involved in bacterial oxidation and reduction of inorganic arsenic.

Authors:  Simon Silver; L T Phung
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

5.  Whole proteome analysis of post-translational modifications: applications of mass-spectrometry for proteogenomic annotation.

Authors:  Nitin Gupta; Stephen Tanner; Navdeep Jaitly; Joshua N Adkins; Mary Lipton; Robert Edwards; Margaret Romine; Andrei Osterman; Vineet Bafna; Richard D Smith; Pavel A Pevzner
Journal:  Genome Res       Date:  2007-08-09       Impact factor: 9.043

6.  Comparative proteogenomics: combining mass spectrometry and comparative genomics to analyze multiple genomes.

Authors:  Nitin Gupta; Jamal Benhamida; Vipul Bhargava; Daniel Goodman; Elisabeth Kain; Ian Kerman; Ngan Nguyen; Noah Ollikainen; Jesse Rodriguez; Jian Wang; Mary S Lipton; Margaret Romine; Vineet Bafna; Richard D Smith; Pavel A Pevzner
Journal:  Genome Res       Date:  2008-04-21       Impact factor: 9.043

7.  Reduction of uranium(VI) phosphate during growth of the thermophilic bacterium Thermoterrabacterium ferrireducens.

Authors:  T V Khijniak; A I Slobodkin; V Coker; J C Renshaw; F R Livens; E A Bonch-Osmolovskaya; N-K Birkeland; N N Medvedeva-Lyalikova; J R Lloyd
Journal:  Appl Environ Microbiol       Date:  2005-10       Impact factor: 4.792

8.  ArcS, the cognate sensor kinase in an atypical Arc system of Shewanella oneidensis MR-1.

Authors:  Jürgen Lassak; Anna-Lena Henche; Lucas Binnenkade; Kai M Thormann
Journal:  Appl Environ Microbiol       Date:  2010-03-26       Impact factor: 4.792

9.  Orenia metallireducens sp. nov. Strain Z6, a Novel Metal-Reducing Member of the Phylum Firmicutes from the Deep Subsurface.

Authors:  Yiran Dong; Robert A Sanford; Maxim I Boyanov; Kenneth M Kemner; Theodore M Flynn; Edward J O'Loughlin; Yun-Juan Chang; Randall A Locke; Joseph R Weber; Sheila M Egan; Roderick I Mackie; Isaac Cann; Bruce W Fouke
Journal:  Appl Environ Microbiol       Date:  2016-10-14       Impact factor: 4.792

10.  An empirical strategy for characterizing bacterial proteomes across species in the absence of genomic sequences.

Authors:  Joshua E Turse; Matthew J Marshall; James K Fredrickson; Mary S Lipton; Stephen J Callister
Journal:  PLoS One       Date:  2010-11-12       Impact factor: 3.240

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