Literature DB >> 12437125

A dimeric mutant of the homotetrameric single-stranded DNA binding protein from Escherichia coli.

Marco Landwehr1, Ute Curth, Claus Urbanke.   

Abstract

A single amino acid substitution (Y78R) at the dimer-dimer interface of homotetrameric single stranded DNA binding protein from E. coli (EcoSSB) renders the protein a stable dimer. This dimer can bind single-stranded DNA albeit with greatly reduced affinity. In vivo this dimeric SSB cannot replace homotetrameric EcoSSB. Amino acid changes at the rim of the dimer-dimer interface nearby (Q76K, Q76E) show an electrostatic interaction between a charged amino acid at position 76 and bound nucleic acid. In conclusion, nucleic acid binding to homotetrameric SSB must take place across both dimers to achieve functionally correct binding.

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Year:  2002        PMID: 12437125     DOI: 10.1515/BC.2002.151

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  6 in total

1.  A stable tetramer is not the only oligomeric state that mitochondrial single-stranded DNA binding proteins can adopt.

Authors:  Saurabh P Singh; Vandna Kukshal; Roberto Galletto
Journal:  J Biol Chem       Date:  2019-01-07       Impact factor: 5.157

2.  DNA polymerase III chi subunit ties single-stranded DNA binding protein to the bacterial replication machinery.

Authors:  Gregor Witte; Claus Urbanke; Ute Curth
Journal:  Nucleic Acids Res       Date:  2003-08-01       Impact factor: 16.971

3.  Biophysical analysis of Thermus aquaticus single-stranded DNA binding protein.

Authors:  Gregor Witte; Roman Fedorov; Ute Curth
Journal:  Biophys J       Date:  2007-12-07       Impact factor: 4.033

4.  Site-directed mutagenesis of the χ subunit of DNA polymerase III and single-stranded DNA-binding protein of E. coli reveals key residues for their interaction.

Authors:  Natalie Naue; Roman Fedorov; Andreas Pich; Dietmar J Manstein; Ute Curth
Journal:  Nucleic Acids Res       Date:  2010-10-23       Impact factor: 16.971

5.  3D structure of Thermus aquaticus single-stranded DNA-binding protein gives insight into the functioning of SSB proteins.

Authors:  Roman Fedorov; Gregor Witte; Claus Urbanke; Dietmar J Manstein; Ute Curth
Journal:  Nucleic Acids Res       Date:  2006-12-05       Impact factor: 16.971

6.  The mitochondrial single-stranded DNA binding protein from S. cerevisiae, Rim1, does not form stable homo-tetramers and binds DNA as a dimer of dimers.

Authors:  Saurabh P Singh; Vandna Kukshal; Paolo De Bona; Edwin Antony; Roberto Galletto
Journal:  Nucleic Acids Res       Date:  2018-08-21       Impact factor: 16.971

  6 in total

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