Literature DB >> 12434002

Novel repair activities of AlkA (3-methyladenine DNA glycosylase II) and endonuclease VIII for xanthine and oxanine, guanine lesions induced by nitric oxide and nitrous acid.

Hiroaki Terato1, Aya Masaoka, Kenjiro Asagoshi, Akiko Honsho, Yoshihiko Ohyama, Toshinori Suzuki, Masaki Yamada, Keisuke Makino, Kazuo Yamamoto, Hiroshi Ide.   

Abstract

Nitrosation of guanine in DNA by nitrogen oxides such as nitric oxide (NO) and nitrous acid leads to formation of xanthine (Xan) and oxanine (Oxa), potentially cytotoxic and mutagenic lesions. In the present study, we have examined the repair capacity of DNA N-glycosylases from Escherichia coli for Xan and Oxa. The nicking assay with the defined substrates containing Xan and Oxa revealed that AlkA [in combination with endonuclease (Endo) IV] and Endo VIII recognized Xan in the tested enzymes. The activity (V(max)/K(m)) of AlkA for Xan was 5-fold lower than that for 7-methylguanine, and that of Endo VIII was 50-fold lower than that for thymine glycol. The activity of AlkA and Endo VIII for Xan was further substantiated by the release of [(3)H]Xan from the substrate. The treatment of E.coli with N-methyl-N'-nitro-N-nitrosoguanidine increased the Xan-excising activity in the cell extract from alkA(+) but not alkA(-) strains. The alkA and nei (the Endo VIII gene) double mutant, but not the single mutants, exhibited increased sensitivity to nitrous acid relative to the wild type strain. AlkA and Endo VIII also exhibited excision activity for Oxa, but the activity was much lower than that for Xan.

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Year:  2002        PMID: 12434002      PMCID: PMC137176          DOI: 10.1093/nar/gkf630

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  50 in total

1.  Identification and characterization of a reaction product of 2'-deoxyoxanosine with glycine.

Authors:  T Suzuki; M Yamada; H Ide; K Kanaori; K Tajima; T Morii; K Makino
Journal:  Chem Res Toxicol       Date:  2000-04       Impact factor: 3.739

2.  Deglycosylation susceptibility and base-pairing stability of 2'-deoxyoxanosine in oligodeoxynucleotide.

Authors:  T Suzuki; Y Matsumura; H Ide; K Kanaori; K Tajima; K Makino
Journal:  Biochemistry       Date:  1997-07-01       Impact factor: 3.162

3.  Synthesis and properties of oligonucleotides containing 2'-deoxynebularine and 2'-deoxyxanthosine.

Authors:  R Eritja; D M Horowitz; P A Walker; J P Ziehler-Martin; M S Boosalis; M F Goodman; K Itakura; B E Kaplan
Journal:  Nucleic Acids Res       Date:  1986-10-24       Impact factor: 16.971

4.  A sensitive genetic assay for the detection of cytosine deamination: determination of rate constants and the activation energy.

Authors:  L A Frederico; T A Kunkel; B R Shaw
Journal:  Biochemistry       Date:  1990-03-13       Impact factor: 3.162

5.  Three-dimensional structure of a DNA repair enzyme, 3-methyladenine DNA glycosylase II, from Escherichia coli.

Authors:  Y Yamagata; M Kato; K Odawara; Y Tokuno; Y Nakashima; N Matsushima; K Yasumura; K Tomita; K Ihara; Y Fujii; Y Nakabeppu; M Sekiguchi; S Fujii
Journal:  Cell       Date:  1996-07-26       Impact factor: 41.582

6.  Characterization of endonuclease III (nth) and endonuclease VIII (nei) mutants of Escherichia coli K-12.

Authors:  Y Saito; F Uraki; S Nakajima; A Asaeda; K Ono; K Kubo; K Yamamoto
Journal:  J Bacteriol       Date:  1997-06       Impact factor: 3.490

7.  Endonuclease V of Escherichia coli prevents mutations from nitrosative deamination during nitrate/nitrite respiration.

Authors:  B Weiss
Journal:  Mutat Res       Date:  2001-01-05       Impact factor: 2.433

8.  DNA glycosylases, endonucleases for apurinic/apyrimidinic sites, and base excision-repair.

Authors:  T Lindahl
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1979

9.  Efficient nitroso group transfer from N-nitrosoindoles to nucleotides and 2'-deoxyguanosine at physiological pH. A new pathway for N-nitrosocompounds to exert genotoxicity.

Authors:  L T Lucas; D Gatehouse; D E Shuker
Journal:  J Biol Chem       Date:  1999-06-25       Impact factor: 5.157

10.  DNA deaminating ability and genotoxicity of nitric oxide and its progenitors.

Authors:  D A Wink; K S Kasprzak; C M Maragos; R K Elespuru; M Misra; T M Dunams; T A Cebula; W H Koch; A W Andrews; J S Allen
Journal:  Science       Date:  1991-11-15       Impact factor: 47.728

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  17 in total

1.  Defects in purine nucleotide metabolism lead to substantial incorporation of xanthine and hypoxanthine into DNA and RNA.

Authors:  Bo Pang; Jose L McFaline; Nicholas E Burgis; Min Dong; Koli Taghizadeh; Matthew R Sullivan; C Eric Elmquist; Richard P Cunningham; Peter C Dedon
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-30       Impact factor: 11.205

2.  Kinetic mechanism for the excision of hypoxanthine by Escherichia coli AlkA and evidence for binding to DNA ends.

Authors:  Boyang Zhao; Patrick J O'Brien
Journal:  Biochemistry       Date:  2011-04-28       Impact factor: 3.162

Review 3.  Endonuclease V: an unusual enzyme for repair of DNA deamination.

Authors:  Weiguo Cao
Journal:  Cell Mol Life Sci       Date:  2012-12-20       Impact factor: 9.261

4.  HMGN1 protein regulates poly(ADP-ribose) polymerase-1 (PARP-1) self-PARylation in mouse fibroblasts.

Authors:  Aya Masaoka; Natalie R Gassman; Padmini S Kedar; Rajendra Prasad; Esther W Hou; Julie K Horton; Michael Bustin; Samuel H Wilson
Journal:  J Biol Chem       Date:  2012-06-26       Impact factor: 5.157

5.  Identification of Escherichia coli mismatch-specific uracil DNA glycosylase as a robust xanthine DNA glycosylase.

Authors:  Hyun-Wook Lee; Allyn R Brice; Charles B Wright; Brian N Dominy; Weiguo Cao
Journal:  J Biol Chem       Date:  2010-09-17       Impact factor: 5.157

6.  Catalytic mechanism of Escherichia coli endonuclease VIII: roles of the intercalation loop and the zinc finger.

Authors:  Konstantin Y Kropachev; Dmitry O Zharkov; Arthur P Grollman
Journal:  Biochemistry       Date:  2006-10-03       Impact factor: 3.162

7.  Oxanine DNA glycosylase activities in mammalian systems.

Authors:  Liang Dong; Lisiane B Meira; Tapas K Hazra; Leona D Samson; Weiguo Cao
Journal:  DNA Repair (Amst)       Date:  2007-10-22

8.  Structure of the E. coli DNA glycosylase AlkA bound to the ends of duplex DNA: a system for the structure determination of lesion-containing DNA.

Authors:  Brian R Bowman; Seongmin Lee; Shuyu Wang; Gregory L Verdine
Journal:  Structure       Date:  2008-08-06       Impact factor: 5.006

9.  Cleavage of deoxyoxanosine-containing oligodeoxyribonucleotides by bacterial endonuclease V.

Authors:  Thomas M Hitchcock; Honghai Gao; Weiguo Cao
Journal:  Nucleic Acids Res       Date:  2004-08-02       Impact factor: 16.971

10.  A kinetic platform to determine the fate of nitric oxide in Escherichia coli.

Authors:  Jonathan L Robinson; Mark P Brynildsen
Journal:  PLoS Comput Biol       Date:  2013-05-02       Impact factor: 4.475

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