Literature DB >> 12414728

Intron status and 3'-end formation control cotranscriptional export of mRNA.

Elissa P Lei1, Pamela A Silver.   

Abstract

Messenger RNA export factors are recruited to genes in a transcription-dependent manner. To ascertain the mechanism of this process, we show that RNA polymerase II transcription is sufficient to recruit the Saccharomyces cerevisiae hnRNP protein Npl3 to a gene independent of RNA sequence. In contrast, the cotranscriptional recruitment of the RNA-binding protein Yra1 is dependent on pre-mRNA processing. Yra1 associates with introns of intron-containing genes in a splicing-dependent manner. Conversely, Yra1 recruitment to genes without introns is not dependent on splicing. Finally, 3'-end formation is required for Yra1 recruitment to genes regardless of intron status.

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Year:  2002        PMID: 12414728      PMCID: PMC187473          DOI: 10.1101/gad.1032902

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  39 in total

1.  TREX is a conserved complex coupling transcription with messenger RNA export.

Authors:  Katja Strässer; Seiji Masuda; Paul Mason; Jens Pfannstiel; Marisa Oppizzi; Susana Rodriguez-Navarro; Ana G Rondón; Andres Aguilera; Kevin Struhl; Robin Reed; Ed Hurt
Journal:  Nature       Date:  2002-04-28       Impact factor: 49.962

2.  Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.

Authors:  Donny D Licatalosi; Gabrielle Geiger; Michelle Minet; Stephanie Schroeder; Kate Cilli; J Bryan McNeil; David L Bentley
Journal:  Mol Cell       Date:  2002-05       Impact factor: 17.970

3.  Transcription factor TFIID recruits factor CPSF for formation of 3' end of mRNA.

Authors:  J C Dantonel; K G Murthy; J L Manley; L Tora
Journal:  Nature       Date:  1997-09-25       Impact factor: 49.962

4.  Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores.

Authors:  H Santos-Rosa; H Moreno; G Simos; A Segref; B Fahrenkrog; N Panté; E Hurt
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

5.  Role of polyadenylation in nucleocytoplasmic transport of mRNA.

Authors:  Y Huang; G G Carmichael
Journal:  Mol Cell Biol       Date:  1996-04       Impact factor: 4.272

6.  Potential RNA binding proteins in Saccharomyces cerevisiae identified as suppressors of temperature-sensitive mutations in NPL3.

Authors:  M Henry; C Z Borland; M Bossie; P A Silver
Journal:  Genetics       Date:  1996-01       Impact factor: 4.562

7.  A protein that shuttles between the nucleus and the cytoplasm is an important mediator of RNA export.

Authors:  M S Lee; M Henry; P A Silver
Journal:  Genes Dev       Date:  1996-05-15       Impact factor: 11.361

8.  Hrp1, a sequence-specific RNA-binding protein that shuttles between the nucleus and the cytoplasm, is required for mRNA 3'-end formation in yeast.

Authors:  M M Kessler; M F Henry; E Shen; J Zhao; S Gross; P A Silver; C L Moore
Journal:  Genes Dev       Date:  1997-10-01       Impact factor: 11.361

9.  ALY, a context-dependent coactivator of LEF-1 and AML-1, is required for TCRalpha enhancer function.

Authors:  L Bruhn; A Munnerlyn; R Grosschedl
Journal:  Genes Dev       Date:  1997-03-01       Impact factor: 11.361

10.  Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae.

Authors:  M S Longtine; A McKenzie; D J Demarini; N G Shah; A Wach; A Brachat; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

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  57 in total

1.  Transitions in RNA polymerase II elongation complexes at the 3' ends of genes.

Authors:  Minkyu Kim; Seong-Hoon Ahn; Nevan J Krogan; Jack F Greenblatt; Stephen Buratowski
Journal:  EMBO J       Date:  2004-01-22       Impact factor: 11.598

2.  Perturbation of transcription elongation influences the fidelity of internal exon inclusion in Saccharomyces cerevisiae.

Authors:  Kenneth James Howe; Caroline M Kane; Manuel Ares
Journal:  RNA       Date:  2003-08       Impact factor: 4.942

3.  Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes.

Authors:  Katharine Compton Abruzzi; Scott Lacadie; Michael Rosbash
Journal:  EMBO J       Date:  2004-06-10       Impact factor: 11.598

Review 4.  Nucleocytoplasmic transport: integrating mRNA production and turnover with export through the nuclear pore.

Authors:  Christian Dimaano; Katharine S Ullman
Journal:  Mol Cell Biol       Date:  2004-04       Impact factor: 4.272

5.  Viral regulation of mRNA export.

Authors:  Rozanne M Sandri-Goldin
Journal:  J Virol       Date:  2004-05       Impact factor: 5.103

6.  Export and stability of naturally intronless mRNAs require specific coding region sequences and the TREX mRNA export complex.

Authors:  Haixin Lei; Anusha P Dias; Robin Reed
Journal:  Proc Natl Acad Sci U S A       Date:  2011-10-18       Impact factor: 11.205

7.  Viral factors reveal a role for REF/Aly in nuclear RNA stability.

Authors:  Sarah H Stubbs; Olga V Hunter; Ashley Hoover; Nicholas K Conrad
Journal:  Mol Cell Biol       Date:  2012-01-30       Impact factor: 4.272

8.  A Kaposi's sarcoma virus RNA element that increases the nuclear abundance of intronless transcripts.

Authors:  Nicholas K Conrad; Joan A Steitz
Journal:  EMBO J       Date:  2005-04-28       Impact factor: 11.598

9.  Rds3p is required for stable U2 snRNP recruitment to the splicing apparatus.

Authors:  Qiang Wang; Brian C Rymond
Journal:  Mol Cell Biol       Date:  2003-10       Impact factor: 4.272

10.  The THP1-SAC3-SUS1-CDC31 complex works in transcription elongation-mRNA export preventing RNA-mediated genome instability.

Authors:  Cristina González-Aguilera; Cristina Tous; Belén Gómez-González; Pablo Huertas; Rosa Luna; Andrés Aguilera
Journal:  Mol Biol Cell       Date:  2008-07-30       Impact factor: 4.138

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