Literature DB >> 12408828

The sigma(70) subunit of RNA polymerase is contacted by the (lambda)Q antiterminator during early elongation.

Bryce E Nickels1, Christine W Roberts, Haitao Sun, Jeffrey W Roberts, Ann Hochschild.   

Abstract

The Q protein of bacteriophage lambda is a transcription antiterminator that modifies the elongation properties of E. coli RNA polymerase (RNAP). To do this, DNA-bound (lambda)Q must first engage a paused elongation complex. Here we show that this engagement of (lambda)Q with RNAP involves an interaction between (lambda)Q and sigma(70), demonstrating that sigma(70) can be a target of regulation during elongation. Furthermore, we provide evidence that this interaction between (lambda)Q and sigma(70) stabilizes a conformation of RNAP that requires the disengagement of a segment of sigma(70) from the core enzyme. Recent structure-based models posit that the transition from the initiation to the elongation phase of transcription involves the staged displacement of sigma(70) from the RNAP core. Our findings provide support for this proposal.

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Year:  2002        PMID: 12408828     DOI: 10.1016/s1097-2765(02)00648-2

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  33 in total

1.  RNA polymerase mutations that impair conversion to a termination-resistant complex by Q antiterminator proteins.

Authors:  Thomas J Santangelo; Rachel Anne Mooney; Robert Landick; Jeffrey W Roberts
Journal:  Genes Dev       Date:  2003-05-15       Impact factor: 11.361

2.  DNA binding regions of Q proteins of phages lambda and phi80.

Authors:  Jingshu Guo; Jeffrey W Roberts
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

3.  Purification and characterization of the AAA+ domain of Sinorhizobium meliloti DctD, a sigma54-dependent transcriptional activator.

Authors:  Hao Xu; Baohua Gu; B Tracy Nixon; Timothy R Hoover
Journal:  J Bacteriol       Date:  2004-06       Impact factor: 3.490

4.  Two transcription pause elements underlie a σ70-dependent pause cycle.

Authors:  Eric J Strobel; Jeffrey W Roberts
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-27       Impact factor: 11.205

5.  Bacterial RNA polymerase can retain σ70 throughout transcription.

Authors:  Timothy T Harden; Christopher D Wells; Larry J Friedman; Robert Landick; Ann Hochschild; Jane Kondev; Jeff Gelles
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-05       Impact factor: 11.205

6.  The interaction between sigma70 and the beta-flap of Escherichia coli RNA polymerase inhibits extension of nascent RNA during early elongation.

Authors:  Bryce E Nickels; Sean J Garrity; Vladimir Mekler; Leonid Minakhin; Konstantin Severinov; Richard H Ebright; Ann Hochschild
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-10       Impact factor: 11.205

7.  RNA-mediated destabilization of the sigma(70) region 4/beta flap interaction facilitates engagement of RNA polymerase by the Q antiterminator.

Authors:  Bryce E Nickels; Christine W Roberts; Jeffrey W Roberts; Ann Hochschild
Journal:  Mol Cell       Date:  2006-11-03       Impact factor: 17.970

8.  A sigma-core interaction of the RNA polymerase holoenzyme that enhances promoter escape.

Authors:  Mark Leibman; Ann Hochschild
Journal:  EMBO J       Date:  2007-03-01       Impact factor: 11.598

9.  A transcription antiterminator constructs a NusA-dependent shield to the emerging transcript.

Authors:  Smita Shankar; Asma Hatoum; Jeffrey W Roberts
Journal:  Mol Cell       Date:  2007-09-21       Impact factor: 17.970

10.  The protein interaction network of bacteriophage lambda with its host, Escherichia coli.

Authors:  Sonja Blasche; Stefan Wuchty; Seesandra V Rajagopala; Peter Uetz
Journal:  J Virol       Date:  2013-09-18       Impact factor: 5.103

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