Literature DB >> 12406778

Transcript analysis of genes encoding a family 61 endoglucanase and a putative membrane-anchored family 9 glycosyl hydrolase from Phanerochaete chrysosporium.

Amber Vanden Wymelenberg1, Stuart Denman, Diane Dietrich, Jennifer Bassett, Xiaochun Yu, Rajai Atalla, Paul Predki, Ulla Rudsander, Tuula T Teeri, Daniel Cullen.   

Abstract

Phanerochaete chrysosporium cellulase genes were cloned and characterized. The cel61A product was structurally similar to fungal endoglucanases of glycoside hydrolase family 61, whereas the cel9A product revealed similarities to Thermobifida fusca Cel9A (E4), an enzyme with both endo- and exocellulase characteristics. The fungal Cel9A is apparently a membrane-bound protein, which is very unusual for microbial cellulases. Transcript levels of both genes were substantially higher in cellulose-grown cultures than in glucose-grown cultures. These results show that P. chrysosporium possesses a wide array of conventional and unconventional cellulase genes.

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Year:  2002        PMID: 12406778      PMCID: PMC129927          DOI: 10.1128/AEM.68.11.5765-5768.2002

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  33 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  An intron-containing glycoside hydrolase family 9 cellulase gene encodes the dominant 90 kDa component of the cellulosome of the anaerobic fungus Piromyces sp. strain E2.

Authors:  Peter J M Steenbakkers; Wimal Ubhayasekera; Harry J A M Goossen; Erik M H M van Lierop; Chris van der Drift; Godfried D Vogels; Sherry L Mowbray; Huub J M Op den Camp
Journal:  Biochem J       Date:  2002-07-01       Impact factor: 3.857

3.  Gene cloning and characterization of a novel cellulose-binding beta-glucosidase from Phanerochaete chrysosporium.

Authors:  B Li; V Renganathan
Journal:  Appl Environ Microbiol       Date:  1998-07       Impact factor: 4.792

4.  Phanerochaete chrysosporium cellobiohydrolase and cellobiose dehydrogenase transcripts in wood.

Authors:  M A Vallim; B J Janse; J Gaskell; A A Pizzirani-Kleiner; D Cullen
Journal:  Appl Environ Microbiol       Date:  1998-05       Impact factor: 4.792

5.  Substrate-dependent differential splicing of introns in the regions encoding the cellulose binding domains of two exocellobiohydrolase I-like genes in Phanerochaete chrysosporium.

Authors:  P R Birch; P F Sims; P Broda
Journal:  Appl Environ Microbiol       Date:  1995-10       Impact factor: 4.792

6.  Identification of the gene encoding the major cellobiohydrolase of the white rot fungus Phanerochaete chrysosporium.

Authors:  A Vanden Wymelenberg; S Covert; D Cullen
Journal:  Appl Environ Microbiol       Date:  1993-10       Impact factor: 4.792

7.  New families in the classification of glycosyl hydrolases based on amino acid sequence similarities.

Authors:  B Henrissat; A Bairoch
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

8.  Homologous expression and characterization of Cel61A (EG IV) of Trichoderma reesei.

Authors:  J Karlsson; M Saloheimo; M Siika-Aho; M Tenkanen; M Penttilä; F Tjerneld
Journal:  Eur J Biochem       Date:  2001-12

9.  Isolation, characterization, and analysis of the expression of the cbhII gene of Phanerochaete chrysosporium.

Authors:  C A Tempelaars; P R Birch; P F Sims; P Broda
Journal:  Appl Environ Microbiol       Date:  1994-12       Impact factor: 4.792

10.  The 1,4-beta-D-glucan cellobiohydrolases from Phanerochaete chrysosporium. I. A system of synergistically acting enzymes homologous to Trichoderma reesei.

Authors:  E Uzcategui; A Ruiz; R Montesino; G Johansson; G Pettersson
Journal:  J Biotechnol       Date:  1991-07       Impact factor: 3.307

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  13 in total

1.  Structure and transcriptional impact of divergent repetitive elements inserted within Phanerochaete chrysosporium strain RP-78 genes.

Authors:  Luis F Larrondo; Paulo Canessa; Rafael Vicuña; Philip Stewart; Amber Vanden Wymelenberg; Dan Cullen
Journal:  Mol Genet Genomics       Date:  2006-10-11       Impact factor: 3.291

2.  Characterization of an endoglucanase belonging to a new subfamily of glycoside hydrolase family 45 of the basidiomycete Phanerochaete chrysosporium.

Authors:  Kiyohiko Igarashi; Takuya Ishida; Chiaki Hori; Masahiro Samejima
Journal:  Appl Environ Microbiol       Date:  2008-08-01       Impact factor: 4.792

3.  Atypical biosynthetic properties of a Delta 12/nu+3 desaturase from the model basidiomycete Phanerochaete chrysosporium.

Authors:  Robert E Minto; Brenda J Blacklock; Hina Younus; Andrew C Pratt
Journal:  Appl Environ Microbiol       Date:  2008-12-16       Impact factor: 4.792

4.  Isolation and purification of pyranose 2-oxidase from Phanerochaete chrysosporium and characterization of gene structure and regulation.

Authors:  Theodorus H de Koker; Michael D Mozuch; Daniel Cullen; Jill Gaskell; Philip J Kersten
Journal:  Appl Environ Microbiol       Date:  2004-10       Impact factor: 4.792

5.  A novel extracellular multicopper oxidase from Phanerochaete chrysosporium with ferroxidase activity.

Authors:  Luis F Larrondo; Loreto Salas; Francisco Melo; Rafael Vicuña; Daniel Cullen
Journal:  Appl Environ Microbiol       Date:  2003-10       Impact factor: 4.792

6.  Structure, organization, and transcriptional regulation of a family of copper radical oxidase genes in the lignin-degrading basidiomycete Phanerochaete chrysosporium.

Authors:  Amber Vanden Wymelenberg; Grzegorz Sabat; Michael Mozuch; Philip J Kersten; Dan Cullen; Robert A Blanchette
Journal:  Appl Environ Microbiol       Date:  2006-07       Impact factor: 4.792

7.  Carbohydrate-active enzymes from the zygomycete fungus Rhizopus oryzae: a highly specialized approach to carbohydrate degradation depicted at genome level.

Authors:  Evy Battaglia; Isabelle Benoit; Joost van den Brink; Ad Wiebenga; Pedro M Coutinho; Bernard Henrissat; Ronald P de Vries
Journal:  BMC Genomics       Date:  2011-01-17       Impact factor: 3.969

8.  The putative endoglucanase PcGH61D from Phanerochaete chrysosporium is a metal-dependent oxidative enzyme that cleaves cellulose.

Authors:  Bjørge Westereng; Takuya Ishida; Gustav Vaaje-Kolstad; Miao Wu; Vincent G H Eijsink; Kiyohiko Igarashi; Masahiro Samejima; Jerry Ståhlberg; Svein J Horn; Mats Sandgren
Journal:  PLoS One       Date:  2011-11-23       Impact factor: 3.240

9.  Cellulolytic potential of thermophilic species from four fungal orders.

Authors:  Peter Kamp Busk; Lene Lange
Journal:  AMB Express       Date:  2013-08-19       Impact factor: 3.298

10.  Systematic screening of glycosylation- and trafficking-associated gene knockouts in Saccharomyces cerevisiae identifies mutants with improved heterologous exocellulase activity and host secretion.

Authors:  Tzi-Yuan Wang; Chih-Jen Huang; Hsin-Liang Chen; Po-Chun Ho; Huei-Mien Ke; Hsing-Yi Cho; Sz-Kai Ruan; Kuo-Yen Hung; I-Li Wang; Ya-Wun Cai; Huang-Mo Sung; Wen-Hsiung Li; Ming-Che Shih
Journal:  BMC Biotechnol       Date:  2013-09-03       Impact factor: 2.563

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