Literature DB >> 12402352

HIVdb: a database of the structures of human immunodeficiency virus protease.

Jiri Vondrasek, Alexander Wlodawer.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2002        PMID： 12402352     DOI： 10.1002/prot.10246

Source DB:  PubMed          Journal:  Proteins        ISSN： 0887-3585


× No keyword cloud information.
  21 in total

1.  Protein-ligand binding free energy estimation using molecular mechanics and continuum electrostatics. Application to HIV-1 protease inhibitors.

Authors:  V Zoete; O Michielin; M Karplus
Journal:  J Comput Aided Mol Des       Date:  2003-12       Impact factor: 3.686

2.  Insights into saquinavir resistance in the G48V HIV-1 protease: quantum calculations and molecular dynamic simulations.

Authors:  Kitiyaporn Wittayanarakul; Ornjira Aruksakunwong; Suwipa Saen-oon; Wasun Chantratita; Vudhichai Parasuk; Pornthep Sompornpisut; Supot Hannongbua
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

3.  Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations.

Authors:  Yuan Luo; Özlem Uzuner; Peter Szolovits
Journal:  Brief Bioinform       Date:  2016-02-05       Impact factor: 11.622

4.  Crystal structure of HIV-1 protease in situ product complex and observation of a low-barrier hydrogen bond between catalytic aspartates.

Authors:  Amit Das; Vishal Prashar; Smita Mahale; L Serre; J-L Ferrer; M V Hosur
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-20       Impact factor: 11.205

5.  HIV-1 protease flaps spontaneously close to the correct structure in simulations following manual placement of an inhibitor into the open state.

Authors:  Viktor Hornak; Asim Okur; Robert C Rizzo; Carlos Simmerling
Journal:  J Am Chem Soc       Date:  2006-03-08       Impact factor: 15.419

6.  HIV-1 protease flaps spontaneously open and reclose in molecular dynamics simulations.

Authors:  Viktor Hornak; Asim Okur; Robert C Rizzo; Carlos Simmerling
Journal:  Proc Natl Acad Sci U S A       Date:  2006-01-17       Impact factor: 11.205

Review 7.  Targeting structural flexibility in HIV-1 protease inhibitor binding.

Authors:  Viktor Hornak; Carlos Simmerling
Journal:  Drug Discov Today       Date:  2006-12-20       Impact factor: 7.851

8.  The open structure of a multi-drug-resistant HIV-1 protease is stabilized by crystal packing contacts.

Authors:  Melinda Layten; Viktor Hornak; Carlos Simmerling
Journal:  J Am Chem Soc       Date:  2006-10-18       Impact factor: 15.419

9.  Expression, purification and preliminary X-ray crystallographic studies of the human immunodeficiency virus 1 subtype C protease.

Authors:  Roxana M Coman; Arthur Robbins; Maureen M Goodenow; Robert McKenna; Ben M Dunn
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2007-03-30

10.  Atomistic simulations of the HIV-1 protease folding inhibition.

Authors:  Gennady Verkhivker; Guido Tiana; Carlo Camilloni; Davide Provasi; Ricardo A Broglia
Journal:  Biophys J       Date:  2008-03-28       Impact factor: 4.033
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.