Literature DB >> 12400858

HEPT derivatives as non-nucleoside inhibitors of HIV-1 reverse transcriptase: QSAR studies agree with the crystal structures.

Anderson Coser Gaudio1, Carlos Alberto Montanari.   

Abstract

The interest in the non-nucleoside inhibitors (NNIs) to the reverse transcriptase (RT) as anti-AIDS agents has grown in the last ten years. The compound 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) is the precursor of the most studied class of NNIs, from which hundreds of derivatives have been synthesized and tested. There are at least twelve QSAR studies about the HEPT derivatives as RT inhibitors. Most of the predictions derived by these studies are related to the nature of the active site near the substituents at positions N-1 and C-5, and at the C-6 phenyl ring. The validity of these models has been checked against the 3-D structure of HIV 1 RT-HEPT complexes available. Most of these predictions were confirmed at the molecular level.

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Year:  2002        PMID: 12400858     DOI: 10.1023/a:1020280627193

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  22 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Comparative Quantitative Structureminus signActivity Relationship Studies on Anti-HIV Drugs.

Authors:  Rajni Garg; Satya P. Gupta; Hua Gao; Mekapati Suresh Babu; Asim Kumar Debnath; Corwin Hansch
Journal:  Chem Rev       Date:  1999-12-08       Impact factor: 60.622

3.  High resolution structures of HIV-1 RT from four RT-inhibitor complexes.

Authors:  J Ren; R Esnouf; E Garman; D Somers; C Ross; I Kirby; J Keeling; G Darby; Y Jones; D Stuart
Journal:  Nat Struct Biol       Date:  1995-04

4.  Complexes of HIV-1 reverse transcriptase with inhibitors of the HEPT series reveal conformational changes relevant to the design of potent non-nucleoside inhibitors.

Authors:  A L Hopkins; J Ren; R M Esnouf; B E Willcox; E Y Jones; C Ross; T Miyasaka; R T Walker; H Tanaka; D K Stammers; D I Stuart
Journal:  J Med Chem       Date:  1996-04-12       Impact factor: 7.446

5.  Structure-activity correlation study of HIV-1 inhibitors: electronic and molecular parameters.

Authors:  S Hannongbua; L Lawtrakul; J Limtrakul
Journal:  J Comput Aided Mol Des       Date:  1996-04       Impact factor: 3.686

6.  Use of artificial neural networks in a QSAR study of anti-HIV activity for a large group of HEPT derivatives.

Authors:  M Jalali-Heravi; F Parastar
Journal:  J Chem Inf Comput Sci       Date:  2000 Jan-Feb

Review 7.  Protease inhibitors for the treatment of human immunodeficiency virus infection.

Authors:  T N Kakuda; K A Struble; S C Piscitelli
Journal:  Am J Health Syst Pharm       Date:  1998-02-01       Impact factor: 2.637

Review 8.  Perspectives of non-nucleoside reverse transcriptase inhibitors (NNRTIs) in the therapy of HIV-1 infection.

Authors:  E De Clercq
Journal:  Farmaco       Date:  1999 Jan-Feb

9.  A 3D QSAR study of a series of HEPT analogues: the influence of conformational mobility on HIV-1 reverse transcriptase inhibition.

Authors:  D B Kireev; J R Chrétien; D S Grierson; C Monneret
Journal:  J Med Chem       Date:  1997-12-19       Impact factor: 7.446

10.  Synthesis and antiviral activity of 6-benzyl analogs of 1-[(2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT) as potent and selective anti-HIV-1 agents.

Authors:  H Tanaka; H Takashima; M Ubasawa; K Sekiya; N Inouye; M Baba; S Shigeta; R T Walker; E De Clercq; T Miyasaka
Journal:  J Med Chem       Date:  1995-07-21       Impact factor: 7.446

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  4 in total

1.  3D QSAR studies on binding affinities of coumarin natural products for glycosomal GAPDH of Trypanosoma cruzi.

Authors:  Irwin R A Menezes; Julio C D Lopes; Carlos A Montanari; Glaucius Oliva; Fernando Pavão; Marcelo S Castilho; Paulo C Vieira; Mônica T Pupo
Journal:  J Comput Aided Mol Des       Date:  2003 May-Jun       Impact factor: 3.686

2.  A ligand's-eye view of protein binding.

Authors:  Robert D Clark
Journal:  J Comput Aided Mol Des       Date:  2008-01-24       Impact factor: 3.686

3.  Residue-ligand interaction energy (ReLIE) on a receptor-dependent 3D-QSAR analysis of S- and NH-DABOs as non-nucleoside reverse transcriptase inhibitors.

Authors:  Monique Araújo de Brito; Carlos Rangel Rodrigues; José Jair Viana Cirino; Jocley Queiroz Araújo; Thiago Honório; Lúcio Mendes Cabral; Ricardo Bicca de Alencastro; Helena Carla Castro; Magaly Girão Albuquerque
Journal:  Molecules       Date:  2012-06-25       Impact factor: 4.411

Review 4.  Computational drug design strategies applied to the modelling of human immunodeficiency virus-1 reverse transcriptase inhibitors.

Authors:  Lucianna Helene Santos; Rafaela Salgado Ferreira; Ernesto Raúl Caffarena
Journal:  Mem Inst Oswaldo Cruz       Date:  2015-11       Impact factor: 2.743

  4 in total

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