Literature DB >> 10661561

Use of artificial neural networks in a QSAR study of anti-HIV activity for a large group of HEPT derivatives.

M Jalali-Heravi1, F Parastar.   

Abstract

Anti-HIV activity for a set of 107 inhibitors of the HIV-1 reverse transcriptase, derivatives of 1-[2-hydroxyethoxy)methyl]-6-(phenylthio)thymine (HEPT), was modeled with the aid of chemometric techniques. The activity of these compounds was estimated by means of multiple linear regression (MLR) and artificial neural network (ANN) techniques and compared with the previous works. The results obtained using the MLR method indicate that the anti-HIV activity of the HEPT derivatives depends on the reverse of standard shadow area on the YZ plane and the ratio of the partial charges of the most positive atom to the most negative atom of the molecule. The best computational neural network model was a fully-connected, feed-forward method with a 6-6-1 architecture. The mean-square error for the prediction set using this network was 0.372 compared with 0.780 obtained using the MLR technique. Comparison of the quality of the ANN of this work with different MLR models shows that ANN has a better predictive power.

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Year:  2000        PMID: 10661561     DOI: 10.1021/ci990314+

Source DB:  PubMed          Journal:  J Chem Inf Comput Sci        ISSN: 0095-2338


  7 in total

1.  A ligand's-eye view of protein binding.

Authors:  Robert D Clark
Journal:  J Comput Aided Mol Des       Date:  2008-01-24       Impact factor: 3.686

2.  HEPT derivatives as non-nucleoside inhibitors of HIV-1 reverse transcriptase: QSAR studies agree with the crystal structures.

Authors:  Anderson Coser Gaudio; Carlos Alberto Montanari
Journal:  J Comput Aided Mol Des       Date:  2002-04       Impact factor: 3.686

3.  A novel simple QSAR model for the prediction of anti-HIV activity using multiple linear regression analysis.

Authors:  Antreas Afantitis; Georgia Melagraki; Haralambos Sarimveis; Panayiotis A Koutentis; John Markopoulos; Olga Igglessi-Markopoulou
Journal:  Mol Divers       Date:  2006-08-01       Impact factor: 2.943

4.  Computational studies and drug design for HIV-1 reverse transcriptase inhibitors of 3',4'-di-O-(S)-camphanoyl-(+)-cis-khellactone (DCK) analogs.

Authors:  Hai-Feng Chen; Bo-Tao Fan; Chen-Yang Zhao; Lan Xie; Chun-Hong Zhao; Ting Zhou; Kuo-Hsiung Lee; Graham Allaway
Journal:  J Comput Aided Mol Des       Date:  2005-04       Impact factor: 3.686

Review 5.  Recent advances in ligand-based drug design: relevance and utility of the conformationally sampled pharmacophore approach.

Authors:  Chayan Acharya; Andrew Coop; James E Polli; Alexander D Mackerell
Journal:  Curr Comput Aided Drug Des       Date:  2011-03       Impact factor: 1.606

6.  Artificial neural networks: non-linear QSAR studies of HEPT derivatives as HIV-1 reverse transcriptase inhibitors.

Authors:  Latifa Douali; Didier Villemin; Abdelmajid Zyad; Driss Cherqaoui
Journal:  Mol Divers       Date:  2004       Impact factor: 2.943

7.  Estimation of Anti-HIV Activity of HEPT Analogues Using MLR, ANN, and SVM Techniques.

Authors:  Basheerulla Shaik; Tabassum Zafar; Vijay K Agrawal
Journal:  Int J Med Chem       Date:  2013-12-30
  7 in total

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